RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 UGT3A1Q6NUS8 523 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 DRICH1Q6PGQ1 229 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 P3H2Q8IVL5 708 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 OR5L2Q8NGL0 311 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 OR14A16Q8NHC5 309 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 SLC5A11Q8WWX8 675 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 NEIL2Q969S2 332 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 GAL3ST3Q96A11 431 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 HSPBAP1Q96EW2 488 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 HIST1H2AHQ96KK5 128 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 HIST1H2AJQ99878 128 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 H2AFJQ9BTM1 129 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 PELI2Q9HAT8 420 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 SEMA4BQ9NPR2 832 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 TRMT6Q9UJA5 497 aaKnown RBP13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 ADAM21Q9UKJ8 722 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 MRPS33Q9Y291 106 aaKnown RBP13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 CLCA3PQ9Y6N3 262 aa13.13□□□□□ -0.31
PRPF40A-211ENST00000493468 A0A1W2PPR1 153 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 CTAGE15A4D2H0 777 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 INAFM1C9JVW0 142 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 ZNF354AO60765 605 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 SLC1A2P43004 574 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 STXBP1P61764 594 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 RNF4P78317 190 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 CCZ1BP86790 482 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 CCZ1P86791 482 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 THOC5Q13769 683 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 BMPR2Q13873 1038 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 DHX34Q14147 1143 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 SF3B4Q15427 424 aaKnown RBP eCLIP13.12□□□□□ -0.312e-14■■■■■ 48
PRPF40A-211ENST00000493468 MPEG1Q2M385 716 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 TOR1AIP1Q5JTV8 583 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 ADGRD1Q6QNK2 874 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 CTAGE6Q86UF2 777 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 MYO1HQ8N1T3 1032 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 LINC01560Q8TB33 94 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 PAQR8Q8TEZ7 354 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 EEF1AKMT1Q8WVE0 214 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 ATL1Q8WXF7 558 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 PYCR2Q96C36 320 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 AIF1LQ9BQI0 150 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 AICDAQ9GZX7 198 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 ZFP64Q9NPA5 681 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 NINQ8N4C6 2090 aa13.12□□□□□ -0.31
PRPF40A-211ENST00000493468 CES2O00748 559 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 SMPD2O60906 423 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 IL18BPO95998 194 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 F7P08709 466 aaPredicted RBP13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 RFPL3SP0C7P2 107 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 HNRNPFP52597 415 aaKnown RBP13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 RUNX2Q13950 521 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 CCNG2Q16589 344 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 NSUN5P2Q63ZY6 315 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 LIX1Q8N485 282 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 CALML6Q8TD86 181 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 PTPMT1Q8WUK0 201 aaPredicted RBP13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 PIGTQ969N2 578 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 ISL2Q96A47 359 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 ZNF669Q96BR6 464 aaPredicted RBP13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 FBXL8Q96CD0 374 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 NTNG2Q96CW9 530 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 FAR2Q96K12 515 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 Q96MF0 132 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 PRDM14Q9GZV8 571 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 SLC6A15Q9H2J7 730 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 ARL15Q9NXU5 204 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 VTI1BQ9UEU0 232 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 NBEAL1Q6ZS30 2694 aa13.11□□□□□ -0.31
PRPF40A-211ENST00000493468 A0A088AWK7 358 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 ZCWPW2A0A1B0GU75 182 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 TCRBV7S3A2A0A539 114 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 MAGEB16A2A368 324 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 PABPN1LA6NDY0 278 aaKnown RBP13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 LRRC3CA6NJW4 275 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 NRDCO43847 1150 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 ZNF10P21506 573 aaPredicted RBP13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 OPRM1P35372 400 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 PIGAP37287 484 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 MAGEA6P43360 314 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 KCNJ2P63252 427 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 BTN3A2P78410 334 aa13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 SARNPP82979 210 aaKnown RBP13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 TIAL1Q01085 375 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 CRYZQ08257 329 aaKnown RBP13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 SIX1Q15475 284 aaPredicted RBP13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
PRPF40A-211ENST00000493468 SLC22A10Q63ZE4 541 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms