RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ADAM29Q9UKF5 820 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 HEATR5BQ9P2D3 2071 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 A0A1W2PQ72 361 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 BLACEA4D250 179 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 A8MUA0 341 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 TMPRSS11DO60235 418 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 CTNSO60931 367 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 SEC24DO94855 1032 aaPredicted RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 CHEK2O96017 543 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 FGF4P08620 206 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 DHRS4L1P0CG22 281 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 HNRNPFP52597 415 aaKnown RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 MAPK12P53778 367 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 HMGCS1Q01581 520 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 GALNT1Q10472 559 aaPredicted RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 TBL3Q12788 808 aaKnown RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 STX4Q12846 297 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 PCOLCEQ15113 449 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 COMMD6Q7Z4G1 85 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 CLNKQ7Z7G1 428 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 HOMEZQ8IX15 550 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 KBTBD2Q8IY47 623 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 CLYBLQ8N0X4 340 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 C1orf52Q8N6N3 182 aaKnown RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 AGR3Q8TD06 166 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 THOC3Q96J01 351 aaKnown RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 BBC3Q96PG8 261 aaPredicted RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 LPAR4Q99677 370 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 RPF2Q9H7B2 306 aaKnown RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 WDR41Q9HAD4 459 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 ZNF71Q9NQZ8 489 aaPredicted RBP13.12□□□□□ -0.31
CCM2-217ENST00000492883 GPR83Q9NYM4 423 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 TRAF6Q9Y4K3 522 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 ATG4BQ9Y4P1 393 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
CCM2-217ENST00000492883 CELSR3Q9NYQ7 3312 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 IGKV3D-11A0A0A0MRZ8 115 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 TCRBV16S1A1N1A0A5B0 115 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 SERTM1A2A2V5 107 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 SLC28A1O00337 649 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 PROM1O43490 865 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 KLHL41O60662 606 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 HSPA4LO95757 839 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 IFNA16P05015 189 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 SERPINE1P05121 402 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 BGNP21810 368 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 TPP2P29144 1249 aaPredicted RBP13.11□□□□□ -0.31
CCM2-217ENST00000492883 PGDP52209 483 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 SLC18A1P54219 525 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
CCM2-217ENST00000492883 SOX8P57073 446 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 TNFRSF17Q02223 184 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 ACSM2AQ08AH3 577 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 Q0VFX4 171 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 MYBPC3Q14896 1274 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 BTBD16Q32M84 506 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 SOWAHCQ53LP3 525 aaPredicted RBP13.11□□□□□ -0.31
CCM2-217ENST00000492883 SH2D4BQ5SQS7 431 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 ACSM2BQ68CK6 577 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 MRM1Q6IN84 353 aaKnown RBP13.11□□□□□ -0.31
CCM2-217ENST00000492883 TCTN3Q6NUS6 607 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 PAPD4Q6PIY7 484 aaKnown RBP13.11□□□□□ -0.31
CCM2-217ENST00000492883 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 SCUBE1Q8IWY4 988 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 OR6Y1Q8NGX8 325 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 TANKQ92844 425 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 ATP6V1G3Q96LB4 118 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 IMMP1LQ96LU5 166 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 ALOXE3Q9BYJ1 711 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 LHPPQ9H008 270 aa13.11□□□□□ -0.31
CCM2-217ENST00000492883 PNO1Q9NRX1 252 aaKnown RBP13.11□□□□□ -0.31
CCM2-217ENST00000492883 PCDHGA9Q9Y5G4 932 aaKnown RBP13.11□□□□□ -0.31
CCM2-217ENST00000492883 CACNA1BQ00975 2339 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 MYOCOSA0A1B0GUC4 107 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 A0A1W2PR48 441 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 TMEM114B3SHH9 223 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 LDB3O75112 727 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 CEACAM4O75871 244 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 ALPPP05187 535 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 SERPINA7P05543 415 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 UQCRHP07919 91 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 PRR35P0CG20 571 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 NR2F6P10588 404 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 TNNI3P19429 210 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 GRK2P25098 689 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 WDR4P57081 412 aaKnown RBP13.1□□□□□ -0.31
CCM2-217ENST00000492883 ABCE1P61221 599 aaKnown RBP13.1□□□□□ -0.31
CCM2-217ENST00000492883 AP2B1P63010 937 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 ID2Q02363 134 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 STX3Q13277 289 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 SERTAD2Q14140 314 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 EXT1Q16394 746 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 LACTB2Q53H82 288 aaPredicted RBP13.1□□□□□ -0.31
CCM2-217ENST00000492883 SPIN4Q56A73 249 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 KANK2Q63ZY3 851 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms