RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MLF2Q15773 248 aaPredicted RBP3.32□□□□□ -1.88
CLK1-213ENST00000492793 PLPP4Q5VZY2 271 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 ZNF772Q68DY9 489 aaPredicted RBP3.32□□□□□ -1.88
CLK1-213ENST00000492793 CD164L2Q6UWJ8 174 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 GSG1LQ6UXU4 331 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 B3GLCTQ6Y288 498 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 C3P1Q6ZMU1 363 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 KCNMB4Q86W47 210 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 ZFAND4Q86XD8 727 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 CACUL1Q86Y37 369 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 TBC1D10CQ8IV04 446 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 STHQ8IWL8 128 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 OR4N5Q8IXE1 308 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 FBXW8Q8N3Y1 598 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 SPPL2AQ8TCT8 520 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 PCED1BQ96HM7 432 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 SLC45A3Q96JT2 553 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 PRICKLE1Q96MT3 831 aaPredicted RBP3.32□□□□□ -1.88
CLK1-213ENST00000492793 AGPAT1Q99943 283 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 LRRC61Q9BV99 259 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 DCLRE1BQ9H816 532 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 SP140LQ9H930 580 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 WDR41Q9HAD4 459 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 IL1RAPQ9NPH3 570 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 ASIC3Q9UHC3 531 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 MOSPD1Q9UJG1 213 aa3.32□□□□□ -1.88
CLK1-213ENST00000492793 MRTO4Q9UKD2 239 aaKnown RBP3.32□□□□□ -1.88
CLK1-213ENST00000492793 MRPS18CQ9Y3D5 142 aaKnown RBP3.32□□□□□ -1.88
CLK1-213ENST00000492793 ATP6AP2A0A1C7CYW4 349 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 NEDD8-MDP1E9PL57 170 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 KIAA0513O60268 411 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CSO75390 466 aaKnown RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 ANXA9O76027 345 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 STBD1O95210 358 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CPNE6O95741 557 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 SFTPBP07988 381 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 PCP11498 1178 aaKnown RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 AREGP15514 252 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 ZNF18P17022 549 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 GPX3P22352 226 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 MARCKSP29966 332 aaPredicted RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 GABPAQ06546 454 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 PPP1R8Q12972 351 aaKnown RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 NFATC2Q13469 925 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 PDE7AQ13946 482 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CARTPTQ16568 116 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 STX1AQ16623 288 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 UPP1Q16831 310 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 KNOP1Q1ED39 458 aaKnown RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 WSCD2Q2TBF2 565 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CAPN13Q6MZZ7 669 aaPredicted RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 FAAP20Q6NZ36 180 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 ZNF613Q6PF04 617 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CDHR3Q6ZTQ4 885 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CYP4V2Q6ZWL3 525 aaPredicted RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 ZNF410Q86VK4 478 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 FAM131BQ86XD5 332 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CATSPER3Q86XQ3 398 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CNTN4Q8IWV2 1026 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CHPT1Q8WUD6 406 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 TCP11Q8WWU5 503 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 GTF3AQ92664 365 aaKnown RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 ZNF689Q96CS4 500 aaPredicted RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 EEF2KMTQ96G04 330 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 SPATA13Q96N96 652 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 PRAM1Q96QH2 718 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 SSX3Q99909 188 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 CABLES2Q9BTV7 478 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 FUNDC2Q9BWH2 189 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 PINK1Q9BXM7 581 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 STRADBQ9C0K7 418 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 WWP1Q9H0M0 922 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 FNDC4Q9H6D8 234 aaPredicted RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 DBNDD1Q9H9R9 158 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 PNPLA3Q9NST1 481 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 FOXA2Q9Y261 457 aaPredicted RBP3.31□□□□□ -1.88
CLK1-213ENST00000492793 AUP1Q9Y679 476 aa3.31□□□□□ -1.88
CLK1-213ENST00000492793 IGHV4-30-2A0A087WSY4 118 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 OR5H15A6NDH6 313 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 SERINC4A6NH21 518 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 CCDC69A6NI79 296 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 SHISA7A6NL88 538 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 E9PQ18 207 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 RNF103O00237 685 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 SLC28A1O00337 649 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 EEF2KO00418 725 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 SOCS3O14543 225 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 TRAFD1O14545 582 aaPredicted RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 CCSO14618 274 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 VEGFDO43915 354 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 NXPH4O95158 308 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 OR6A2O95222 327 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 CGAP01215 116 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 PPP2R1AP30153 589 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 OR1D2P34982 312 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 NSFP46459 744 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 FHITP49789 147 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 HERV-K104P63124 156 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 FKBP3Q00688 224 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms