RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CTNSO60931 367 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 KERAO60938 352 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 LDB3O75112 727 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 ZFAND5O76080 213 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 SNRPB2P08579 225 aaKnown RBP16.06■□□□□ 0.16
SGMS1-204ENST00000492601 LTA4HP09960 611 aaKnown RBP16.06■□□□□ 0.16
SGMS1-204ENST00000492601 CRABP2P29373 138 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 SSR4P51571 173 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 GPR85P60893 370 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 SLC7A5Q01650 507 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 ID2Q02363 134 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 RCN2Q14257 317 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 ELAVL1Q15717 326 aaKnown RBP16.06■□□□□ 0.16
SGMS1-204ENST00000492601 C3P1Q6ZMU1 363 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 BNC2Q6ZN30 1099 aaPredicted RBP16.06■□□□□ 0.16
SGMS1-204ENST00000492601 CHERPQ8IWX8 916 aaKnown RBP16.06■□□□□ 0.16
SGMS1-204ENST00000492601 MCEMP1Q8IX19 187 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 TMEM132CQ8N3T6 1108 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 ACOT4Q8N9L9 421 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 KCTD4Q8WVF5 259 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 ALOXE3Q9BYJ1 711 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 KCMF1Q9P0J7 381 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 ERVK-11Q9UQG0 969 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 MEMO1Q9Y316 297 aa16.06■□□□□ 0.16
SGMS1-204ENST00000492601 FBN2P35556 2912 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 KLRC4-KLRK1H3BQV0 150 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 K7EPI3 171 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 WWP2O00308 870 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 SAP18O00422 153 aaKnown RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 OR2J2O76002 312 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 TGFB1P01137 390 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 TNNI3P19429 210 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 ATP5A1P25705 553 aaKnown RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 CASP2P42575 452 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 SMSP52788 366 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 IRF9Q00978 393 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 NAB1Q13506 487 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 DDX39BQ13838 428 aaKnown RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 NAA30Q147X3 362 aaPredicted RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 CDSNQ15517 529 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 ZNF630Q2M218 657 aaPredicted RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 AP5B1Q2VPB7 878 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 MROH9Q5TGP6 573 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 MED27Q6P2C8 311 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 XKRXQ6PP77 449 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 FGD2Q7Z6J4 655 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 LAS2Q8IYD9 372 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 RNF175Q8N4F7 328 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 ZNF321PQ8N8H1 164 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 POGLUT1Q8NBL1 392 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 SRFBP1Q8NEF9 429 aaKnown RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 AGAP11Q8TF27 550 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 PTPMT1Q8WUK0 201 aaPredicted RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 UBTD2Q8WUN7 234 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 UBE2E3Q969T4 207 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 PHF12Q96QT6 1004 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 TBCDQ9BTW9 1192 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 SORBS1Q9BX66 1292 aaKnown RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 OR8D2Q9GZM6 311 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 ROGDIQ9GZN7 287 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 LYRM4Q9HD34 91 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 YARS2Q9Y2Z4 477 aaKnown RBP16.05■□□□□ 0.16
SGMS1-204ENST00000492601 ACOT9Q9Y305 439 aa16.05■□□□□ 0.16
SGMS1-204ENST00000492601 POLQO75417 2590 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 NCKAP5O14513 1909 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 TMEM200CA6NKL6 621 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 HS6ST1O60243 411 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 CDC40O60508 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
SGMS1-204ENST00000492601 TNFRSF8P28908 595 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 SSR2P43308 183 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 GUCY2DQ02846 1103 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 E2F2Q14209 437 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 UAP1Q16222 522 aaPredicted RBP16.04■□□□□ 0.16
SGMS1-204ENST00000492601 IL20RBQ6UXL0 311 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 HSDL2Q6YN16 418 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 CHSY3Q70JA7 882 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 DOLPP1Q86YN1 238 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 MYLK4Q86YV6 388 aaPredicted RBP16.04■□□□□ 0.16
SGMS1-204ENST00000492601 CENPLQ8N0S6 344 aaPredicted RBP16.04■□□□□ 0.16
SGMS1-204ENST00000492601 TEX9Q8N6V9 391 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 OR7G3Q8NG95 312 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 OR14A16Q8NHC5 309 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 ASB15Q8WXK1 588 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 DAZLQ92904 295 aaKnown RBP16.04■□□□□ 0.16
SGMS1-204ENST00000492601 OR51B5Q9H339 312 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 TIMMDC1Q9NPL8 285 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 VTI1BQ9UEU0 232 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 ADGRG4Q8IZF6 3080 aa16.04■□□□□ 0.16
SGMS1-204ENST00000492601 TEP1Q99973 2627 aaKnown RBP16.03■□□□□ 0.16
SGMS1-204ENST00000492601 HCFC1P51610 2035 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 A0A1B0GTH9 108 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 A8MVJ9 347 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 C17orf105B2RV13 164 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 PRRG2O14669 202 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 OR6B1O95007 311 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 C2P06681 752 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 MTHFD2P13995 350 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 EPB42P16452 691 aa16.03■□□□□ 0.16
SGMS1-204ENST00000492601 HIST1H1TP22492 207 aaPredicted RBP16.03■□□□□ 0.16
SGMS1-204ENST00000492601 CPN2P22792 545 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms