RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SPTAN1Q13813 2472 aaKnown RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 A0A1B0GUH1 482 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 ASPDHA6ND91 283 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 SYNDIG1LA6NDD5 238 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 PRKNO60260 465 aaPredicted RBP13.98□□□□□ -0.17
TOM1-215ENST00000491987 LDB3O75112 727 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 KRT38O76015 456 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 SCELO95171 688 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 TUBB4AP04350 444 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 CPN2P22792 545 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 COL8A1P27658 744 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 TRHRP34981 398 aaPredicted RBP13.98□□□□□ -0.17
TOM1-215ENST00000491987 CYB561P49447 251 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 HLCSP50747 726 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 GPR143P51810 404 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 RAP1GDS1P52306 607 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 RPS13P62277 151 aaKnown RBP13.98□□□□□ -0.17
TOM1-215ENST00000491987 ALDH6A1Q02252 535 aaKnown RBP13.98□□□□□ -0.17
TOM1-215ENST00000491987 ID2Q02363 134 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 CPSF6Q16630 551 aaKnown RBP eCLIP13.98□□□□□ -0.17
TOM1-215ENST00000491987 MAPKAPK3Q16644 382 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 DEPDC1Q5TB30 811 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 LIPJQ5W064 366 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 ARMC10Q8N2F6 343 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 TMEM132CQ8N3T6 1108 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 FAM98AQ8NCA5 519 aaKnown RBP13.98□□□□□ -0.17
TOM1-215ENST00000491987 KIF18AQ8NI77 898 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 DCAKDQ8WVC6 231 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 SCYL1Q96KG9 808 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 CCDC77Q9BR77 488 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 ALOXE3Q9BYJ1 711 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 IPPKQ9H8X2 491 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 DMRT3Q9NQL9 472 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 XPR1Q9UBH6 696 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 ADGRE2Q9UHX3 823 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 NFU1Q9UMS0 254 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 PPIEQ9UNP9 301 aaKnown RBP13.98□□□□□ -0.17
TOM1-215ENST00000491987 PCDHGA11Q9Y5H2 935 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 TNPO3Q9Y5L0 923 aaKnown RBP13.98□□□□□ -0.17
TOM1-215ENST00000491987 CLCA3PQ9Y6N3 262 aa13.98□□□□□ -0.17
TOM1-215ENST00000491987 A0A087WUV0 522 aaPredicted RBP13.97□□□□□ -0.17
TOM1-215ENST00000491987 TRGV8A0A0C4DH27 118 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 TRIM49D1C9J1S8 452 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 PLPP1O14494 284 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 CDK2AP1O14519 115 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 NME2P1O60361 137 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 ZG16O60844 167 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 ITGA10O75578 1167 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 TNNI3P19429 210 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 NME2P22392 152 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 ARL1P40616 181 aaPredicted RBP13.97□□□□□ -0.17
TOM1-215ENST00000491987 PIK3CBP42338 1070 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 PIK3CGP48736 1102 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 PHEXP78562 749 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 SLAMF1Q13291 335 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 OR4C11Q6IEV9 310 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 C16orf47Q6ZP98 133 aaPredicted RBP13.97□□□□□ -0.17
TOM1-215ENST00000491987 CEP112Q8N8E3 955 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 TMEM125Q96AQ2 219 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 RGMAQ96B86 450 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 REPS1Q96D71 796 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 PHF21BQ96EK2 531 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 CDK15Q96Q40 435 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 CENPKQ9BS16 269 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 NOL11Q9H8H0 719 aaKnown RBP13.97□□□□□ -0.17
TOM1-215ENST00000491987 TRIM45Q9H8W5 580 aaPredicted RBP13.97□□□□□ -0.17
TOM1-215ENST00000491987 SH3BGRL2Q9UJC5 107 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 RNF11Q9Y3C5 154 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 ICE1Q9Y2F5 2266 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 CROCCQ5TZA2 2017 aa13.97□□□□□ -0.17
TOM1-215ENST00000491987 EXOC1LA0A1B0GW35 172 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 NPIPA5E9PKD4 350 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 H0YIV9 168 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 UGDHO60701 494 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 SMIM24O75264 130 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 ZFAND5O76080 213 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 MLYCDO95822 493 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 RBP1P09455 135 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 CNTFP26441 200 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 SERTAD2Q14140 314 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 ZRSR2Q15696 482 aaKnown RBP13.96□□□□□ -0.17
TOM1-215ENST00000491987 TSNAXIP1Q2TAA8 658 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 OR4N5Q8IXE1 308 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 CYP4Z2PQ8N1L4 340 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 TMEM156Q8N614 296 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 CPSF7Q8N684 471 aaKnown RBP13.96□□□□□ -0.17
TOM1-215ENST00000491987 ZNF321PQ8N8H1 164 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 L3MBTL4Q8NA19 623 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 OR52B6Q8NGF0 335 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 PTPMT1Q8WUK0 201 aaPredicted RBP13.96□□□□□ -0.17
TOM1-215ENST00000491987 DAZLQ92904 295 aaKnown RBP13.96□□□□□ -0.17
TOM1-215ENST00000491987 RELTQ969Z4 430 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 GPR137Q96N19 417 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 OR8D2Q9GZM6 311 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 LIN28AQ9H9Z2 209 aaKnown RBP13.96□□□□□ -0.17
TOM1-215ENST00000491987 VTI1BQ9UEU0 232 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 NPIPA1Q9UND3 350 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 TSC22D4Q9Y3Q8 395 aa13.96□□□□□ -0.17
TOM1-215ENST00000491987 DOPEY1Q5JWR5 2465 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms