RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 SMIM10Q96HG1 83 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 FAR2Q96K12 515 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 AIF1LQ9BQI0 150 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 TRIM54Q9BYV2 358 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 EXO5Q9H790 373 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 LIN28AQ9H9Z2 209 aaKnown RBP13.4□□□□□ -0.26
SSR4-212ENST00000491833 SACM1LQ9NTJ5 587 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 MRPS33Q9Y291 106 aaKnown RBP13.4□□□□□ -0.26
SSR4-212ENST00000491833 MAD1L1Q9Y6D9 718 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 AKAP6Q13023 2319 aa13.4□□□□□ -0.26
SSR4-212ENST00000491833 ATP6AP2A0A1C7CYW4 349 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 TGFBR3LH3BV60 316 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 WWP2O00308 870 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 CLDN4O14493 209 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 ATP6AP2O75787 350 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 SERPINA6P08185 405 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 ASCL1P50553 236 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 RAB38P57729 211 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 STXBP1P61764 594 aaKnown RBP13.39□□□□□ -0.27
SSR4-212ENST00000491833 MORF4L2Q15014 288 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 RBBP5Q15291 538 aaKnown RBP13.39□□□□□ -0.27
SSR4-212ENST00000491833 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
SSR4-212ENST00000491833 KCTD19Q17RG1 926 aaPredicted RBP13.39□□□□□ -0.27
SSR4-212ENST00000491833 DEFB113Q30KQ7 82 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 ZNF750Q32MQ0 723 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 HSP90AA5PQ58FG0 334 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 XKR6Q5GH73 641 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 FBXW10Q5XX13 1052 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 PAQR3Q6TCH7 311 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 HSDL2Q6YN16 418 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 TMEM132CQ8N3T6 1108 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 GOLM1Q8NBJ4 401 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 FAM222BQ8WU58 562 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 SCYL1Q96KG9 808 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 SERPINB12Q96P63 405 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 IARS2Q9NSE4 1012 aaKnown RBP13.39□□□□□ -0.27
SSR4-212ENST00000491833 ALKBH4Q9NXW9 302 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 CBLCQ9ULV8 474 aa13.39□□□□□ -0.27
SSR4-212ENST00000491833 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 A0A088AWK7 358 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 TRGV5A0A0B4J1U4 118 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 HSPB2A8KAH6 182 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 HCN1O60741 890 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 GUCA1CO95843 209 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 P04436 131 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 CELA3AP09093 270 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 ENO2P09104 434 aaPredicted RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 ZNF10P21506 573 aaPredicted RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 SAT1P21673 171 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 ADSLP30566 484 aaPredicted RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 DNASE1L1P49184 302 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 HK2P52789 917 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 BTN3A2P78410 334 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 TIAL1Q01085 375 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSR4-212ENST00000491833 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 BMPR2Q13873 1038 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 KEAP1Q14145 624 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 HSPB2Q16082 182 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 HYAL4Q2M3T9 481 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 ZNF595Q8IYB9 648 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 FAM47BQ8NA70 645 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 WFDC11Q8NEX6 87 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 SREK1Q8WXA9 508 aaKnown RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 DAZLQ92904 295 aaKnown RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 C18orf12Q96KH6 178 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 NPLQ9BXD5 320 aaPredicted RBP13.38□□□□□ -0.27
SSR4-212ENST00000491833 SNX24Q9Y343 169 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 CLDN16Q9Y5I7 305 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 CLCA3PQ9Y6N3 262 aa13.38□□□□□ -0.27
SSR4-212ENST00000491833 A0A0G2JN53 185 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 DVL2O14641 736 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 ATE1O95260 518 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 IFNA16P05015 189 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 TACR1P25103 407 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 HNRNPFP52597 415 aaKnown RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 CDKN2DP55273 166 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 ARL4CP56559 192 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 IL2P60568 153 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 FOXO1Q12778 655 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 SLC10A1Q14973 349 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 RBM20Q5T481 1227 aaKnown RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 RNASEH2BQ5TBB1 312 aaKnown RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 OPN5Q6U736 354 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 NXPE4Q6UWF7 544 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 Q71RC1 249 aaPredicted RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 CLNKQ7Z7G1 428 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 PDIK1LQ8N165 341 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 FBXW8Q8N3Y1 598 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 RELL2Q8NC24 303 aaPredicted RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 C2CD4AQ8NCU7 369 aaPredicted RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 MORN4Q8NDC4 146 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 TMEM52Q8NDY8 209 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 MCUQ8NE86 351 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 OR14A16Q8NHC5 309 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 RNASE6Q93091 150 aaKnown RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 SGCZQ96LD1 299 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 SMR3AQ99954 134 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms