RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	YBX1	P67809	324 aa	Known RBP	12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	RHD	Q02161	417 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	SLC9A5	Q14940	896 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	TGIF1	Q15583	401 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	PGS1	Q32NB8	556 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	FAM174B	Q3ZCQ3	159 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	TOR1AIP1	Q5JTV8	583 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	ARHGAP40	Q5TG30	622 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	FBXO42	Q6P3S6	717 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	FAM92B	Q6ZTR7	304 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	RNF44	Q7L0R7	432 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	TRIM73	Q86UV7	250 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	PLD3	Q8IV08	490 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	RIMKLA	Q8IXN7	391 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	C19orf47	Q8N9M1	422 aa	Known RBP	12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	ZSCAN1	Q8NBB4	408 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	LSM14A	Q8ND56	463 aa	Known RBP	12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	CDC26	Q8NHZ8	85 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	C16orf78	Q8WTQ4	265 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	SLC41A2	Q96JW4	573 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	EBPL	Q9BY08	206 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	REEP4	Q9H6H4	257 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	DDX31	Q9H8H2	851 aa	Known RBP	12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	CPNE5	Q9HCH3	593 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	SIDT1	Q9NXL6	827 aa	Known RBP	12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	L3MBTL1	Q9Y468	752 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	CELSR3	Q9NYQ7	3312 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	ZFYVE26	Q68DK2	2539 aa		12.8	□□□□□ -0.36
NUP188-208	ENST00000491502	SAP18	O00422	153 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	FBP2	O00757	339 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	PLPP1	O14494	284 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	SCAMP2	O15127	329 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ERI3	O43414	337 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	KIF1C	O43896	1103 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	DNAJA2	O60884	412 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ERN1	O75460	977 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	DRD2	P14416	443 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	IL12A	P29459	219 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	TRPC1	P48995	793 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	HNRNPF	P52597	415 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	RAE1	P78406	368 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ACY1	Q03154	408 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	C2orf80	Q0P641	193 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	NDUFA9	Q16795	377 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	SAMD4B	Q5PRF9	694 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	TMTC4	Q5T4D3	741 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	FCRL6	Q6DN72	434 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ADNP2	Q6IQ32	1131 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	CAMKMT	Q7Z624	323 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	DHDDS	Q86SQ9	333 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	FAM20C	Q8IXL6	584 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ULK2	Q8IYT8	1036 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	FBXW8	Q8N3Y1	598 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	IL22RA1	Q8N6P7	574 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	OR8J2	Q8NGG1	315 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	CLHC1	Q8NHS4	586 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	N4BP2L2	Q92802	583 aa	Predicted RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	NKD1	Q969G9	470 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	VPS33A	Q96AX1	596 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	LRRC58	Q96CX6	371 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	MS4A6E	Q96DS6	147 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	TEX37	Q96LM6	180 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	FCRL4	Q96PJ5	515 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	TRAPPC9	Q96Q05	1148 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	OR2A5	Q96R48	311 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	MAP3K3	Q99759	626 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	CTRC	Q99895	268 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	SPRY4	Q9C004	299 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	BHLHE41	Q9C0J9	482 aa	Predicted RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	SLC6A16	Q9GZN6	736 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	RASSF4	Q9H2L5	321 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ACTL8	Q9H568	366 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	PDE7B	Q9NP56	450 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	MIEF1	Q9NQG6	463 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	LYAR	Q9NX58	379 aa	Known RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ADA2	Q9NZK5	511 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	ATP6V1H	Q9UI12	483 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	PCDHGB4	Q9UN71	923 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	SPACA6	W5XKT8	324 aa		12.79	□□□□□ -0.36
NUP188-208	ENST00000491502	NBEA	Q8NFP9	2946 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	IGHV5-51	A0A0C4DH38	117 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502		A0A0J9YVX5	310 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	AKAP10	O43572	662 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	RAD1	O60671	282 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	ZBTB11	O95625	1053 aa	Predicted RBP	12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	FGF5	P12034	268 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	ME2	P23368	584 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	TACR1	P25103	407 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	BSG	P35613	385 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	PLA2G16	P53816	162 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	TAS2R50	P59544	299 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	HSD11B2	P80365	405 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	MAP7	Q14244	749 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	TLR1	Q15399	786 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	HKDC1	Q2TB90	917 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	TCTE1	Q5JU00	501 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	SPANXN4	Q5MJ08	99 aa		12.78	□□□□□ -0.36
NUP188-208	ENST00000491502	WASHC2D	Q5SRD0	308 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms