RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SHANK1Q9Y566 2161 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 A0A1W2PPK0 400 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 ASPDHA6ND91 283 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 PRR32B1ATL7 298 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 SELENOFO60613 162 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 RPS6KA5O75582 802 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 PDE9AO76083 593 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 BAG4O95429 457 aaKnown RBP4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 INHBAP08476 426 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 SPP1P10451 314 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 CD99P14209 185 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 ZNF23P17027 643 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 SLC6A6P31641 620 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 ATP6V1E1P36543 226 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 FMO5P49326 533 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 RGS7P49802 495 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 DVL1P1P54792 670 aaPredicted RBP4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 UBXN1Q04323 297 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 MGAT3Q09327 533 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 UGP2Q16851 508 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 KIF19Q2TAC6 998 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 GLRA4Q5JXX5 417 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 CASC4Q6P4E1 433 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 LINC00696Q6ZRV3 163 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 TMEM179Q6ZVK1 233 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 RAPH1Q70E73 1250 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 TIPARPQ7Z3E1 657 aaKnown RBP4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 DCP1BQ8IZD4 617 aaKnown RBP4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 ARL10Q8N8L6 244 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 RAD54LQ92698 747 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 KRT35Q92764 455 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 RIT1Q92963 219 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 MSANTD3Q96H12 275 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 CCDC43Q96MW1 224 aaKnown RBP4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 NT5C3AQ9H0P0 336 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 TMEM206Q9H813 350 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 SLC38A10Q9HBR0 1119 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 A4GALTQ9NPC4 353 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 AATFQ9NY61 560 aaKnown RBP eCLIP4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 CYP39A1Q9NYL5 469 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 WDR83OSQ9Y284 106 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 MYH7P12883 1935 aa4.46□□□□□ -1.7
SSX2IP-208ENST00000490476 ZNF106Q9H2Y7 1883 aaKnown RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 PLSCR5A0PG75 271 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 LRRD1A4D1F6 860 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 OOEPA6NGQ2 149 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 C5orf52A6NGY3 159 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 DUXAA6NLW8 204 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 SLC33A1O00400 549 aaPredicted RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 SYNGR3O43761 229 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 CTSVO60911 334 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 FCGR3BO75015 233 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 SMIM10L2AP0DMW4 78 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 SMIM10L2BP0DMW5 78 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 IRF2P14316 349 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 PTGER3P43115 390 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 ZNF132P52740 706 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 CLDN6P56747 220 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 AP1B1Q10567 949 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 KIF5AQ12840 1032 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 IZUMO4Q1ZYL8 232 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 TWISTNBQ3B726 338 aaPredicted RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 UGT3A2Q3SY77 523 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 PDSS1Q5T2R2 415 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 CAPRIN2Q6IMN6 1127 aaKnown RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 CYB5D1Q6P9G0 228 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 TUBA1AQ71U36 451 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 LGI2Q8N0V4 545 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 RYBPQ8N488 228 aaPredicted RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 BMPERQ8N8U9 685 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 LMNTD1Q8N9Z9 388 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 LNX1Q8TBB1 728 aaPredicted RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 NUDCD2Q8WVJ2 157 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 IGSF21Q96ID5 467 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 FAM71F1Q96KD3 344 aaPredicted RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 SGK494Q96LW2 274 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 ZNF583Q96ND8 569 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 IL17FQ96PD4 163 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 TUBA1CQ9BQE3 449 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 PSD2Q9BQI7 771 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 URM1Q9BTM9 101 aaKnown RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 MIS12Q9H081 205 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 FKRPQ9H9S5 495 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 UPF2Q9HAU5 1272 aaKnown RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 ZNF334Q9HCZ1 680 aaPredicted RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 TRPV5Q9NQA5 729 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 TCF7L2Q9NQB0 619 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 CACNG4Q9UBN1 327 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 PILRBQ9UKJ0 227 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 LIPT1Q9Y234 373 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 DOCK9Q9BZ29 2069 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 VPS13CQ709C8 3753 aa4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
SSX2IP-208ENST00000490476 ABCA4P78363 2273 aa4.44□□□□□ -1.7
SSX2IP-208ENST00000490476 A0A1W2PRV1 198 aa4.44□□□□□ -1.7
SSX2IP-208ENST00000490476 SMIM30A4D0T7 59 aa4.44□□□□□ -1.7
SSX2IP-208ENST00000490476 CTAGE9A4FU28 777 aa4.44□□□□□ -1.7
SSX2IP-208ENST00000490476 PLOD2O00469 737 aa4.44□□□□□ -1.7
SSX2IP-208ENST00000490476 PRAF2O60831 178 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms