RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 ADGRD1Q6QNK2 874 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 TIFABQ6ZNK6 161 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 RNF175Q8N4F7 328 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 L3MBTL4Q8NA19 623 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 TMEM178AQ8NBL3 297 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 DAZLQ92904 295 aaKnown RBP16.66■□□□□ 0.26
ABCF3-217ENST00000489719 VMP1Q96GC9 406 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 SLX1AQ9BQ83 275 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 MRPL46Q9H2W6 279 aaKnown RBP16.66■□□□□ 0.26
ABCF3-217ENST00000489719 DMRT3Q9NQL9 472 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 MS4A12Q9NXJ0 267 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 PSD3Q9NYI0 1048 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 VTI1BQ9UEU0 232 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 SETXQ7Z333 2677 aaKnown RBP16.66■□□□□ 0.26
ABCF3-217ENST00000489719 RELNP78509 3460 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 TRBV11-1A0A0K0K1C0 115 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 IQANK1A0A1B0GTG1 560 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 ZFAND5O76080 213 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 SP1P08047 785 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 GP1BBP13224 206 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 PPP2R1BP30154 601 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 ARFIP1P53367 373 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 ZRSR2Q15696 482 aaKnown RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 ELAVL1Q15717 326 aaKnown RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 ZNF324BQ6AW86 544 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 TTC19Q6DKK2 380 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 GPR180Q86V85 440 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 CNPY4Q8N129 248 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 FAM98AQ8NCA5 519 aaKnown RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 MDS2Q8NDY4 140 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 THAP3Q8WTV1 239 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 NCLNQ969V3 563 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 TMEM125Q96AQ2 219 aa16.65■□□□□ 0.26
ABCF3-217ENST00000489719 MTFMTQ96DP5 389 aaKnown RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 ERRFI1Q9UJM3 462 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 SPENQ96T58 3664 aaKnown RBP16.65■□□□□ 0.26
ABCF3-217ENST00000489719 MYOCOSA0A1B0GUC4 107 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 TGFBR3LH3BV60 316 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 FOXE1O00358 373 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-217ENST00000489719 OR7A17O14581 309 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 SCELO95171 688 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 FAM153BP0C7A2 387 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 TAC1P20366 129 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 HLCSP50747 726 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 NEK2P51955 445 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 BIKQ13323 160 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 CUL3Q13618 768 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 SLC29A2Q14542 456 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 MAPKAPK3Q16644 382 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 FAM153CQ494X1 144 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 GFRALQ6UXV0 394 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 MILR1Q7Z6M3 343 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 APCDD1LQ8NCL9 501 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 TANKQ92844 425 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 CDK15Q96Q40 435 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 NTMT1Q9BV86 223 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 SORBS1Q9BX66 1292 aaKnown RBP16.64■□□□□ 0.25
ABCF3-217ENST00000489719 RPF2Q9H7B2 306 aaKnown RBP16.64■□□□□ 0.25
ABCF3-217ENST00000489719 PHF11Q9UIL8 331 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 PPIEQ9UNP9 301 aaKnown RBP16.64■□□□□ 0.25
ABCF3-217ENST00000489719 CLDN16Q9Y5I7 305 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 ESPL1Q14674 2120 aa16.64■□□□□ 0.25
ABCF3-217ENST00000489719 SHANK1Q9Y566 2161 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 PLPP1O14494 284 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 LDB3O75112 727 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 NEURL1O76050 574 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 MLYCDO95822 493 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 TRHRP34981 398 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-217ENST00000489719 ZNF468Q5VIY5 522 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-217ENST00000489719 CYP20A1Q6UW02 462 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 ZCCHC7Q8N3Z6 543 aaKnown RBP16.63■□□□□ 0.25
ABCF3-217ENST00000489719 TMEM156Q8N614 296 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 MORN4Q8NDC4 146 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 OR52B6Q8NGF0 335 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 OR14A16Q8NHC5 309 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 WDR20Q8TBZ3 569 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 SCMH1Q96GD3 660 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 RBM18Q96H35 190 aaKnown RBP16.63■□□□□ 0.25
ABCF3-217ENST00000489719 SERPINI1Q99574 410 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 AHSPQ9NZD4 102 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 SEC14L3Q9UDX4 400 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 PCTPQ9UKL6 214 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 HECTD1Q9ULT8 2610 aa16.63■□□□□ 0.25
ABCF3-217ENST00000489719 A0A1B0GUH1 482 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 LRRTM2O43300 516 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 DYRK3O43781 588 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 SLC25A12O75746 678 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 UNC5CO95185 931 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 COX7A2P14406 83 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 MST1P26927 711 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 GCAP28676 217 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 BUD31P41223 144 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 GPR143P51810 404 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 PER3P56645 1201 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 KCNK10P57789 538 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 PMP22Q01453 160 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 ALDH6A1Q02252 535 aaKnown RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 ID2Q02363 134 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 SRSF11Q05519 484 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms