RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 NPHS2Q9NP85 383 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 SLAMF7Q9NQ25 335 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 FIS1Q9Y3D6 152 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 MYO18BQ8IUG5 2567 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 MED13Q9UHV7 2174 aa9.97□□□□□ -0.81
SCAMP4-208ENST00000489554 A0A1W2PQ72 361 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 CFAP73A6NFT4 308 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 IDSB3KWA1 339 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 C4orf51C9J302 202 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 NPIPB8E9PQR5 432 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 MASP2O00187 686 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 VPS4BO75351 444 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 SKAP2O75563 359 aaPredicted RBP9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 HEXBP07686 556 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 CYC1P08574 325 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 SLC35G6P0C7Q6 338 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 PRR35P0CG20 571 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 IDH3AP50213 366 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 LAPTM5Q13571 262 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 PDCD2Q16342 344 aaPredicted RBP9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 AGAP7PQ5VUJ5 663 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 TMEM214Q6NUQ4 689 aaKnown RBP9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 MED27Q6P2C8 311 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 TMIGD1Q6UXZ0 262 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 TRIM46Q7Z4K8 759 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 ASPGQ86U10 573 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 MYLK4Q86YV6 388 aaPredicted RBP9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 Q8NA96 180 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 MFSD9Q8NBP5 474 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 GALNT11Q8NCW6 608 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 HUS1BQ8NHY5 278 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 SLC13A3Q8WWT9 602 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 STON2Q8WXE9 905 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 TM4SF19Q96DZ7 209 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 MAGEB10Q96LZ2 347 aaPredicted RBP9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 AGAP4Q96P64 663 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 OR52B2Q96RD2 323 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 AIF1LQ9BQI0 150 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 MFRPQ9BY79 579 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 NUF2Q9BZD4 464 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 ACPTQ9BZG2 426 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 PITHD1Q9GZP4 211 aaPredicted RBP9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 LHPPQ9H008 270 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 RASSF4Q9H2L5 321 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 ANKHQ9HCJ1 492 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 DMRT3Q9NQL9 472 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 GIMAP2Q9UG22 337 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 PPT2Q9UMR5 302 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 VPS4AQ9UN37 437 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 B3GNT3Q9Y2A9 372 aa9.96□□□□□ -0.82
SCAMP4-208ENST00000489554 UBR5O95071 2799 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 NSG1A0A0A6YYJ2 146 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 MAGEB17A8MXT2 336 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ALOX12BO75342 701 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 LINC00032P0C843 101 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 HMOX2P30519 316 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ARL1P40616 181 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 PIK3CBP42338 1070 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ARFIP2P53365 341 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 AQP5P55064 265 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 SKP1P63208 163 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF33BQ06732 778 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ACTN3Q08043 901 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 SF3A3Q12874 501 aaKnown RBP eCLIP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 PWP1Q13610 501 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 INPP5JQ15735 1006 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 PAGE2BQ5JRK9 111 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 NIPAL1Q6NVV3 410 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 IGFL2Q6UWQ7 119 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 LARP4Q71RC2 724 aaKnown RBP eCLIP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 NDUFAF7Q7L592 441 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ZC3H7AQ8IWR0 971 aaKnown RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 KBTBD2Q8IY47 623 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 KRT78Q8N1N4 520 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 OR9A4Q8NGU2 314 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 MTFMTQ96DP5 389 aaKnown RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 C19orf60Q96EN9 201 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 C11orf24Q96F05 449 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 THOC3Q96J01 351 aaKnown RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 FAR2Q96K12 515 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 MTERF1Q99551 399 aaKnown RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 MS4A8Q9BY19 250 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF717Q9BY31 904 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 WDR55Q9H6Y2 383 aaPredicted RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF160Q9HCG1 818 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 MRGBPQ9NV56 204 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 RIC8BQ9NVN3 520 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 VTI1BQ9UEU0 232 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 SNX6Q9UNH7 406 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 MRPS2Q9Y399 296 aaKnown RBP9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 PCDHGA11Q9Y5H2 935 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 SLC22A7Q9Y694 548 aa9.95□□□□□ -0.82
SCAMP4-208ENST00000489554 TNRC6AQ8NDV7 1962 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 LOC102723996A0A087X1L8 192 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 IGHV1-45A0A0A0MS14 117 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 ATP6AP2A0A1C7CYW4 349 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 SLCO1B7G3V0H7 640 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms