RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
UFD1-209ENST00000489406 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 ACBD3Q9H3P7 528 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 KCNS2Q9ULS6 477 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 SH2B3Q9UQQ2 575 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 ZNF148Q9UQR1 794 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 MMACHCQ9Y4U1 282 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
UFD1-209ENST00000489406 A0A1W2PNV4 684 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 GRID2IPA4D2P6 1211 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 LRRC10BA6NIK2 292 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 HPNP05981 417 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 THBDP07204 575 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 THBS1P07996 1170 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 IGHV4-31P0DP07 118 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 CHRM3P20309 590 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 HNF1AP20823 631 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 KCNJ5P48544 419 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 CDK9P50750 372 aaKnown RBP13.68□□□□□ -0.22
UFD1-209ENST00000489406 RAB8AP61006 207 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 EEF1A1P68104 462 aaKnown RBP13.68□□□□□ -0.22
UFD1-209ENST00000489406 LOXL1Q08397 574 aaPredicted RBP13.68□□□□□ -0.22
UFD1-209ENST00000489406 ASPHQ12797 758 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 NHSL2Q5HYW2 709 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 EEF1A1P5Q5VTE0 462 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 NIPAL1Q6NVV3 410 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 MILR1Q7Z6M3 343 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 MED12LQ86YW9 2145 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 PLD6Q8N2A8 252 aaKnown RBP13.68□□□□□ -0.22
UFD1-209ENST00000489406 TMEM132CQ8N3T6 1108 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 TC2NQ8N9U0 490 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 MFSD9Q8NBP5 474 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 WNT2BQ93097 391 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 FAM136AQ96C01 138 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 PLPPR2Q96GM1 343 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 DOHHQ9BU89 302 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 OPN3Q9H1Y3 402 aaPredicted RBP13.68□□□□□ -0.22
UFD1-209ENST00000489406 P2RY12Q9H244 342 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 ADAP2Q9NPF8 381 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 LCMT1Q9UIC8 334 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 MAPRE3Q9UPY8 281 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 CLDN16Q9Y5I7 305 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 MAGED1Q9Y5V3 778 aaPredicted RBP13.68□□□□□ -0.22
UFD1-209ENST00000489406 CLCA3PQ9Y6N3 262 aa13.68□□□□□ -0.22
UFD1-209ENST00000489406 OR10H2O60403 315 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 STK10O94804 968 aaKnown RBP13.67□□□□□ -0.22
UFD1-209ENST00000489406 CATP04040 527 aaKnown RBP13.67□□□□□ -0.22
UFD1-209ENST00000489406 CTNNA2P26232 953 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 HNF4AP41235 474 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 TBL3Q12788 808 aaKnown RBP13.67□□□□□ -0.22
UFD1-209ENST00000489406 FAPQ12884 760 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 TOMM20Q15388 145 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 EIPR1Q53HC9 387 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 ABHD17CQ6PCB6 329 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 KIAA1328Q86T90 577 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 SCUBE1Q8IWY4 988 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 CA13Q8N1Q1 262 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 FAM13CQ8NE31 585 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 OR5L2Q8NGL0 311 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 GABPB2Q8TAK5 448 aaPredicted RBP13.67□□□□□ -0.22
UFD1-209ENST00000489406 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 ZNF597Q96LX8 424 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 PHACTR1Q9C0D0 580 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 OR8D2Q9GZM6 311 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 PRTFDC1Q9NRG1 225 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 DDX56Q9NY93 547 aaKnown RBP13.67□□□□□ -0.22
UFD1-209ENST00000489406 ELOVL5Q9NYP7 299 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 CNIH4Q9P003 139 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 MARCH4Q9P2E8 410 aaPredicted RBP13.67□□□□□ -0.22
UFD1-209ENST00000489406 ANAPC5Q9UJX4 755 aa13.67□□□□□ -0.22
UFD1-209ENST00000489406 MYOCOSA0A1B0GUC4 107 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 FRG2CA6NGY1 282 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 H0Y3Z8 333 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 NRDCO43847 1150 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 KIAA0513O60268 411 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 IFNA16P05015 189 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 DANCRP0C864 163 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 GRK3P35626 688 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 NAGLUP54802 743 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 SRYQ05066 204 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 SLC13A2Q13183 592 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 KCNJ11Q14654 390 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 ELAVL1Q15717 326 aaKnown RBP13.66□□□□□ -0.22
UFD1-209ENST00000489406 KLHL38Q2WGJ6 581 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 PIGGQ5H8A4 983 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 CNEP1R1Q8N9A8 125 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 OR10G3Q8NGC4 313 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
UFD1-209ENST00000489406 PGM2Q96G03 612 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 KRT12Q99456 494 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 SLC39A3Q9BRY0 314 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 TMEM204Q9BSN7 226 aa13.66□□□□□ -0.22
UFD1-209ENST00000489406 BARX1Q9HBU1 254 aaPredicted RBP13.66□□□□□ -0.22
UFD1-209ENST00000489406 EIF2B3Q9NR50 452 aaKnown RBP13.66□□□□□ -0.22
UFD1-209ENST00000489406 KMT2CQ8NEZ4 4911 aaKnown RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 TRIM3O75382 744 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms