RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 CDC42P60953 191 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 RELAQ04206 551 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 IRF3Q14653 427 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 TIGD6Q17RP2 521 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 TMEM236Q5W0B7 351 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 SLC46A3Q7Z3Q1 461 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 BTLAQ7Z6A9 289 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 DSG4Q86SJ6 1040 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 OR5AR1Q8NGP9 310 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 RPL3LQ92901 407 aaKnown RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 RSPRY1Q96DX4 576 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 IL17FQ96PD4 163 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 ZNF717Q9BY31 904 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 HDAC8Q9BY41 377 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 DCSTAMPQ9H295 470 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 MMP27Q9H306 513 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 TMEM245Q9H330 911 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 IMPAD1Q9NX62 359 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 RAB23Q9ULC3 237 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 DUSP12Q9UNI6 340 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 C1QTNF3-AMACRE9PGA6 284 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 PCDH17O14917 1159 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 CAPN5O15484 640 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 PDPK1O15530 556 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 PDE9AO76083 593 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 C21orf33P30042 268 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 BSGP35613 385 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 FRKP42685 505 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 GSSP48637 474 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 MAPK12P53778 367 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 OLR1P78380 273 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 REEP5Q00765 189 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 HEPACAMQ14CZ8 416 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 GAB4Q2WGN9 574 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 TOR1AIP1Q5JTV8 583 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 USP43Q70EL4 1123 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 LRRTM4Q86VH4 590 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 PIAS4Q8N2W9 510 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 OR9Q2Q8NGE9 314 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 OR5K2Q8NHB8 316 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 PSMA8Q8TAA3 256 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 UTP15Q8TED0 518 aaKnown RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 APOBEC4Q8WW27 367 aaKnown RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 TFGQ92734 400 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 PROX1Q92786 737 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 TM4SF18Q96CE8 201 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 ALOXE3Q9BYJ1 711 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 CHCHD3Q9NX63 227 aaKnown RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 CNOT2Q9NZN8 540 aaKnown RBP13.55□□□□□ -0.24
ABCB1-207ENST00000488737 FTSJ1Q9UET6 329 aa13.55□□□□□ -0.24
ABCB1-207ENST00000488737 EFCAB10A6NFE3 127 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 ZAR1LA6NP61 321 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 C5orf58C9J3I9 102 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 J3KTA2 159 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 PLK4O00444 970 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 TBX6O95947 436 aaPredicted RBP13.54□□□□□ -0.24
ABCB1-207ENST00000488737 RECKO95980 971 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 CD40LGP29965 261 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 SLC6A11P48066 632 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 MESP2Q0VG99 397 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 ZNF234Q14588 700 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 ZNF697Q5TEC3 545 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 TUBA3EQ6PEY2 450 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 CEACAM20Q6UY09 585 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 ADGRF3Q8IZF5 1079 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 MCFD2Q8NI22 146 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 ZNF675Q8TD23 568 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 ITPKCQ96DU7 683 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 SORBS1Q9BX66 1292 aaKnown RBP13.54□□□□□ -0.24
ABCB1-207ENST00000488737 TMEM121BQ9BXQ6 578 aaPredicted RBP13.54□□□□□ -0.24
ABCB1-207ENST00000488737 DSN1Q9H410 356 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.54□□□□□ -0.24
ABCB1-207ENST00000488737 PLAGL1Q9UM63 463 aa13.54□□□□□ -0.24
ABCB1-207ENST00000488737 MYO7AQ13402 2215 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 ADAP00813 363 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 RPLP0P05388 317 aaKnown RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 ADORA3P0DMS8 318 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 CCR8P51685 355 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 SYT16Q17RD7 645 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 COLEC12Q5KU26 742 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 COL13A1Q5TAT6 717 aaPredicted RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 ZNF770Q6IQ21 691 aaPredicted RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 ZNF367Q7RTV3 350 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 SLC44A2Q8IWA5 706 aaPredicted RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 RBM12BQ8IXT5 1001 aaKnown RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 TAGAPQ8N103 731 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 MMP21Q8N119 569 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 KBTBD8Q8NFY9 601 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 SMPDL3AQ92484 453 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 CDCA4Q9BXL8 241 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 NMNAT1Q9HAN9 279 aaPredicted RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 SELENONQ9NZV5 590 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 CXXC1Q9P0U4 656 aaPredicted RBP13.53□□□□□ -0.24
ABCB1-207ENST00000488737 TAC3Q9UHF0 121 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 ADAM29Q9UKF5 820 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 TMEM98Q9Y2Y6 226 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 SNX8Q9Y5X2 465 aa13.53□□□□□ -0.24
ABCB1-207ENST00000488737 METTL15A6NJ78 407 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms