RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 IL12AP29459 219 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 AHRP35869 848 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 HNF4AP41235 474 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 GCGRP47871 477 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 EEFSECP57772 596 aaKnown RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 SNRPNP63162 240 aaKnown RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 CYP4F2P78329 520 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 LAPTM5Q13571 262 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 PDK3Q15120 406 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 CPSF6Q16630 551 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCM2-216ENST00000488727 PRTGQ2VWP7 1150 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 PAGE2BQ5JRK9 111 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 TCTE1Q5JU00 501 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 TMEM164Q5U3C3 297 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 VN1R5Q7Z5H4 357 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 DPP10Q8N608 796 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 CSNK1A1LQ8N752 337 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 PROKR1Q8TCW9 393 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 ZPBPQ9BS86 351 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 NT5DC2Q9H857 520 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 IL1RL2Q9HB29 575 aa18.37■□□□□ 0.53
CCM2-216ENST00000488727 RUVBL1Q9Y265 456 aaKnown RBP18.37■□□□□ 0.53
CCM2-216ENST00000488727 FITM1A5D6W6 292 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 ZNF749O43361 778 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 MED26O95402 600 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 CAPRIN1Q14444 709 aaKnown RBP18.36■□□□□ 0.53
CCM2-216ENST00000488727 NR6A1Q15406 480 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 MED27Q6P2C8 311 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 ASPGQ86U10 573 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 PTRH1Q86Y79 214 aaKnown RBP18.36■□□□□ 0.53
CCM2-216ENST00000488727 LAS2Q8IYD9 372 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 ARHGEF39Q8N4T4 335 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 TBC1D19Q8N5T2 526 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 SLC38A9Q8NBW4 561 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 OR7G3Q8NG95 312 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 CREB3L4Q8TEY5 395 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 SLC13A3Q8WWT9 602 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 TMEM121BQ9BXQ6 578 aaPredicted RBP18.36■□□□□ 0.53
CCM2-216ENST00000488727 SLC29A3Q9BZD2 475 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 ULBP3Q9BZM4 244 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 SPRY4Q9C004 299 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 B3GNT4Q9C0J1 378 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 ASIC5Q9NY37 505 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 PCDHB3Q9Y5E6 796 aa18.36■□□□□ 0.53
CCM2-216ENST00000488727 SLC28A1O00337 649 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 ANKRD28O15084 1053 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 TBX6O95947 436 aaPredicted RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 NTRK1P04629 796 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 JAK1P23458 1154 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 ABRAXAS2Q15018 415 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 GGTA1PQ4G0N0 100 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 PAGE3Q5JUK9 113 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 UGT2A3Q6UWM9 527 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 CYP2R1Q6VVX0 501 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 VPS33AQ96AX1 596 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 CCM2LQ9NUG4 571 aaPredicted RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 GMPR2Q9P2T1 348 aaKnown RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 H0YIV9 168 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 FFAR3O14843 346 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 GPR42O15529 346 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 NDUFS4O43181 175 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 RGS14O43566 566 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 STK17BO94768 372 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 ZNF26P17031 533 aaPredicted RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 CHN2P52757 468 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 MAD2L1Q13257 205 aaPredicted RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 GRM7Q14831 915 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 FXNQ16595 210 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 HIST2H2ACQ16777 129 aaPredicted RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 HIST2H2AA3Q6FI13 130 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 CYP20A1Q6UW02 462 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 TRIM46Q7Z4K8 759 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 RNF175Q8N4F7 328 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 DTWD1Q8N5C7 304 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 KCT2Q8NC54 265 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 C10orf90Q96M02 699 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 FAM192AQ9GZU8 254 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 RHBGQ9H310 441 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 ACTL8Q9H568 366 aa18.35■□□□□ 0.53
CCM2-216ENST00000488727 DHCR7Q9UBM7 475 aaKnown RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 MRPS2Q9Y399 296 aaKnown RBP18.35■□□□□ 0.53
CCM2-216ENST00000488727 TEX51A0A1B0GUA7 166 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 TXNDC9O14530 226 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 SERPIND1P05546 499 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 SLC35G6P0C7Q6 338 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 GSK3BP49841 420 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 HYAL2Q12891 473 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 AP5B1Q2VPB7 878 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 TIGD2Q4W5G0 525 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 ST13P4Q8IZP2 240 aaPredicted RBP18.34■□□□□ 0.53
CCM2-216ENST00000488727 ANKFN1Q8N957 763 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 CAMKVQ8NCB2 501 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 TTLQ8NG68 377 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 WDR20Q8TBZ3 569 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 LRTOMTQ8WZ04 291 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 SLC45A3Q96JT2 553 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 AICDAQ9GZX7 198 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 THSD1Q9NS62 852 aa18.34■□□□□ 0.53
CCM2-216ENST00000488727 TMEM184BQ9Y519 407 aaPredicted RBP18.34■□□□□ 0.53
CCM2-216ENST00000488727 PCDHGA11Q9Y5H2 935 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms