RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 LIME1Q9H400 295 aa12.32□□□□□ -0.44
UBAP2-211ENST00000488443 CLK4Q9HAZ1 481 aaKnown RBP12.32□□□□□ -0.44
UBAP2-211ENST00000488443 SEMA4BQ9NPR2 832 aaPredicted RBP12.32□□□□□ -0.44
UBAP2-211ENST00000488443 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
UBAP2-211ENST00000488443 CCM2LQ9NUG4 571 aaPredicted RBP12.32□□□□□ -0.44
UBAP2-211ENST00000488443 TUBA8Q9NY65 449 aaPredicted RBP12.32□□□□□ -0.44
UBAP2-211ENST00000488443 Q9UFV3 132 aa12.32□□□□□ -0.44
UBAP2-211ENST00000488443 JRKLQ9Y4A0 524 aa12.32□□□□□ -0.44
UBAP2-211ENST00000488443 OARD1Q9Y530 152 aa12.32□□□□□ -0.44
UBAP2-211ENST00000488443 SAP18O00422 153 aaKnown RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 KLK8O60259 260 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 ZNF354AO60765 605 aaPredicted RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 P04436 131 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 CD99P14209 185 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 CNR1P21554 472 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 UQCRC1P31930 480 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 ADH7P40394 386 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 ZFP36L2P47974 494 aaKnown RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 MAN2A2P49641 1150 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 MTTPP55157 894 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 DLX5P56178 289 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 ASPHQ12797 758 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 TERF2Q15554 542 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 VN1R5Q7Z5H4 357 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 LIX1LQ8IVB5 337 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 OR4N5Q8IXE1 308 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 ZNF595Q8IYB9 648 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 FAM109AQ8N4B1 249 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 NKAPQ8N5F7 415 aaKnown RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 OR2L5Q8NG80 312 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 SLC2A12Q8TD20 617 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 SERINC2Q96SA4 455 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 MAPKAP1Q9BPZ7 522 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 FAM173AQ9BQD7 235 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 GPATCH1Q9BRR8 931 aaKnown RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 NPLQ9BXD5 320 aaPredicted RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 POLDIP3Q9BY77 421 aaKnown RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 ZDHHC11Q9H8X9 412 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 CAB39LQ9H9S4 337 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 SACM1LQ9NTJ5 587 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 TRMT1Q9NXH9 659 aaKnown RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 KCNN3Q9UGI6 736 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 CORO1CQ9ULV4 474 aaPredicted RBP12.31□□□□□ -0.44
UBAP2-211ENST00000488443 FAM215AQ9Y5M1 114 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 TACC2O95359 2948 aa12.31□□□□□ -0.44
UBAP2-211ENST00000488443 CYR61O00622 381 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 BCKDKO14874 412 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 ETHE1O95571 254 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 PCNAP12004 261 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 TRPC1P48995 793 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 SLC12A2P55011 1212 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 WNT3P56703 355 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 RNF4P78317 190 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 FASTKD3Q14CZ7 662 aaKnown RBP12.3□□□□□ -0.44
UBAP2-211ENST00000488443 C1orf185Q5T7R7 199 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 WLSQ5T9L3 541 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 NDUFAF5Q5TEU4 345 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 RTL6Q6ICC9 239 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 TRILQ7L0X0 811 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 GALNT7Q86SF2 657 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 ADAMTSL2Q86TH1 951 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 ZC3HC1Q86WB0 502 aaKnown RBP12.3□□□□□ -0.44
UBAP2-211ENST00000488443 GPALPP1Q8IXQ4 340 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 TTLQ8NG68 377 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 OR14A16Q8NHC5 309 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 PTPMT1Q8WUK0 201 aaPredicted RBP12.3□□□□□ -0.44
UBAP2-211ENST00000488443 DAZLQ92904 295 aaKnown RBP12.3□□□□□ -0.44
UBAP2-211ENST00000488443 RHBDF1Q96CC6 855 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 POM121Q96HA1 1249 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 PDLIM5Q96HC4 596 aaKnown RBP12.3□□□□□ -0.44
UBAP2-211ENST00000488443 TMEM79Q9BSE2 394 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 SORBS1Q9BX66 1292 aaKnown RBP12.3□□□□□ -0.44
UBAP2-211ENST00000488443 DNAJC11Q9NVH1 559 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 DAPP1Q9UN19 280 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 PLEKHA6Q9Y2H5 1048 aa12.3□□□□□ -0.44
UBAP2-211ENST00000488443 ARHGAP21Q5T5U3 1957 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 TAPBPO15533 448 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 PHGDHO43175 533 aaKnown RBP12.29□□□□□ -0.44
UBAP2-211ENST00000488443 CCNT2O60583 730 aaKnown RBP12.29□□□□□ -0.44
UBAP2-211ENST00000488443 PRAMEF4O60810 478 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 CTNSO60931 367 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 CLEC3AO75596 197 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 GLSO94925 669 aaPredicted RBP12.29□□□□□ -0.44
UBAP2-211ENST00000488443 TBX6O95947 436 aaPredicted RBP12.29□□□□□ -0.44
UBAP2-211ENST00000488443 GMPRP36959 345 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 MSH2P43246 934 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 SLC6A12P48065 614 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 HNMTP50135 292 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 KCNJ2P63252 427 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 TGM3Q08188 693 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 MGAT5Q09328 741 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 PDIA2Q13087 525 aaKnown RBP12.29□□□□□ -0.44
UBAP2-211ENST00000488443 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
UBAP2-211ENST00000488443 DOC2AQ14183 400 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 SLC10A1Q14973 349 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 PRAMEF9Q5VWM5 478 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 ABHD17CQ6PCB6 329 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 ARSKQ6UWY0 536 aa12.29□□□□□ -0.44
UBAP2-211ENST00000488443 ZNF793Q6ZN11 406 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms