RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ZNF750Q32MQ0 723 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 HIST2H2AA3Q6FI13 130 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 IL20RBQ6UXL0 311 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 HSDL2Q6YN16 418 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 ZNF793Q6ZN11 406 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 CEP128Q6ZU80 1094 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 CD163Q86VB7 1156 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 ACBD4Q8NC06 268 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 PDPRQ8NCN5 879 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 MORN4Q8NDC4 146 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 PSD4Q8NDX1 1056 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 CDKL2Q92772 493 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 MAPKAP1Q9BPZ7 522 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 EFCAB11Q9BUY7 163 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 CD244Q9BZW8 370 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 ENKD1Q9H0I2 346 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 LYRM4Q9HD34 91 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 GRHL1Q9NZI5 618 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 TXNDC16Q9P2K2 825 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 PYCARDQ9ULZ3 195 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 ERVK-11Q9UQG0 969 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 CACNA1CQ13936 2221 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 OTOGQ6ZRI0 2925 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 A0A0G2JMM0 328 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 A0A1W2PPB8 328 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 A0A1W2PRS3 328 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 KIR3DP1A8MWS1 328 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 RTCAO00442 366 aaKnown RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 RAD51CO43502 376 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ZNF354AO60765 605 aaPredicted RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 LDB3O75112 727 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 SH3BGRLO75368 114 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 TGFB1P01137 390 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 TUBB4AP04350 444 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 TNNI3P19429 210 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 SOX3P41225 446 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 MSH2P43246 934 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 HK2P52789 917 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 RAB10P61026 200 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 ID2Q02363 134 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 TGM3Q08188 693 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 STX4Q12846 297 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 E2F2Q14209 437 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 RCN2Q14257 317 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 EMC4Q5J8M3 183 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 PAGE2BQ5JRK9 111 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ISCA2Q86U28 154 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 GPALPP1Q8IXQ4 340 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 EID3Q8N140 333 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ACOT4Q8N9L9 421 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 OR2M7Q8NG81 312 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ZNF473Q8WTR7 871 aaKnown RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 CA5BP1Q8WTZ4 195 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ASB15Q8WXK1 588 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 DAZLQ92904 295 aaKnown RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 EXT2Q93063 718 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ANKRD9Q96BM1 317 aaPredicted RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 KCNC2Q96PR1 638 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 RASL10BQ96S79 203 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 TBCDQ9BTW9 1192 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 MS4A8Q9BY19 250 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 OR8D2Q9GZM6 311 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 ALG9Q9H6U8 611 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 COPS7BQ9H9Q2 264 aaPredicted RBP11.32□□□□□ -0.6
VPS16-208ENST00000487461 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
VPS16-208ENST00000487461 POLQO75417 2590 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 ANKRD17O75179 2603 aaKnown RBP11.31□□□□□ -0.6
VPS16-208ENST00000487461 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 FAM166BA8MTA8 275 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 C17orf105B2RV13 164 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 G3V3Y1 287 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 ETHE1O95571 254 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 S100BP04271 92 aaPredicted RBP11.31□□□□□ -0.6
VPS16-208ENST00000487461 GSTA2P09210 222 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 CNR1P21554 472 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 SSTR2P30874 369 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 SPRP35270 261 aaPredicted RBP11.31□□□□□ -0.6
VPS16-208ENST00000487461 RNF4P78317 190 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 PLGLB1Q02325 96 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 CALCOCO2Q13137 446 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 GRTP1Q5TC63 336 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 TMEM211Q6ICI0 200 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 ARHGAP11AQ6P4F7 1023 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 LRRC70Q7Z2Q7 622 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 MAATS1Q7Z4T9 603 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 CTAGE3PQ8IX95 158 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 OR4N5Q8IXE1 308 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 LAS2Q8IYD9 372 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 RPRMLQ8N4K4 120 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 SRFBP1Q8NEF9 429 aaKnown RBP11.31□□□□□ -0.6
VPS16-208ENST00000487461 SPATA4Q8NEY3 305 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 OR14A16Q8NHC5 309 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 STAG3L4Q8TBR4 150 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 SLC2A12Q8TD20 617 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 SCYL1Q96KG9 808 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms