RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 DEPDC1Q5TB30 811 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 ABHD17BQ5VST6 288 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 SLC6A19Q695T7 634 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 LETMD1Q6P1Q0 360 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 ZYG11AQ6WRX3 759 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 ZNF793Q6ZN11 406 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 RIPOR1Q6ZS17 1223 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 PLPP5Q8NEB5 264 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 WDR20Q8TBZ3 569 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 RDH11Q8TC12 318 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 ZBTB9Q96C00 473 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 HBEGFQ99075 208 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 SERPINI1Q99574 410 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 MAPKAP1Q9BPZ7 522 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 C12orf65Q9H3J6 166 aaKnown RBP9.59□□□□□ -0.87
NEK4-204ENST00000487068 WDR41Q9HAD4 459 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 LYRM4Q9HD34 91 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 MLXIPLQ9NP71 852 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 MID1IP1Q9NPA3 183 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 NECTIN3Q9NQS3 549 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 PNO1Q9NRX1 252 aaKnown RBP9.59□□□□□ -0.87
NEK4-204ENST00000487068 ABI3Q9P2A4 366 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 PHF11Q9UIL8 331 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 EMCNQ9ULC0 261 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 MMACHCQ9Y4U1 282 aa9.59□□□□□ -0.87
NEK4-204ENST00000487068 UBR5O95071 2799 aaPredicted RBP9.59□□□□□ -0.87
NEK4-204ENST00000487068 ZGRF1Q86YA3 2104 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 CCDC151A5D8V7 595 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 SAGE2PA6NJ88 616 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 PPP6CO00743 305 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 RGS16O15492 202 aaPredicted RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 PLIN3O60664 434 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 LDB3O75112 727 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 SPAG7O75391 227 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 F10P00742 488 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 KRT6AP02538 564 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 GBAP04062 536 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 KRT6BP04259 564 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 MYZAPP0CAP1 466 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 CPA3P15088 417 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 IMPDH1P20839 514 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 CRHR1P34998 444 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 TSFMP43897 325 aaKnown RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 KRT6CP48668 564 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 HNRNPFP52597 415 aaKnown RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 PRKAA2P54646 552 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 MLLT10P55197 1068 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 HSD17B7P56937 341 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 SOX8P57073 446 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 SLC26A5P58743 744 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 TNFRSF17Q02223 184 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 LCP2Q13094 533 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 FCRLBQ6BAA4 426 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 PLAG1Q6DJT9 500 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 JMJD6Q6NYC1 403 aaPredicted RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 PAGE2Q7Z2X7 111 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 TRABD2AQ86V40 505 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 ZNF595Q8IYB9 648 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 IQCKQ8N0W5 287 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 TMEM151AQ8N4L1 468 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 MREGQ8N565 214 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 METTL6Q8TCB7 284 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 SREK1Q8WXA9 508 aaKnown RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 PNPLA2Q96AD5 504 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 L3HYPDHQ96EM0 354 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 ZNF382Q96SR6 550 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 WDR77Q9BQA1 342 aaPredicted RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 C1QTNF3Q9BXJ4 246 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 MRPL1Q9BYD6 325 aaKnown RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 ROPN1BQ9BZX4 212 aaPredicted RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.58□□□□□ -0.88
NEK4-204ENST00000487068 ROPN1Q9HAT0 212 aaPredicted RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 ZBTB20Q9HC78 741 aaPredicted RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 PRDM7Q9NQW5 492 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 FARSBQ9NSD9 589 aaKnown RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 LYARQ9NX58 379 aaKnown RBP9.58□□□□□ -0.88
NEK4-204ENST00000487068 AHSPQ9NZD4 102 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 LGALS13Q9UHV8 139 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 B3GNT3Q9Y2A9 372 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 TSC22D4Q9Y3Q8 395 aa9.58□□□□□ -0.88
NEK4-204ENST00000487068 COL12A1Q99715 3063 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 A0A1B0GTL3 188 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 MYOCOSA0A1B0GUC4 107 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 A0A1W2PQ72 361 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 TCRBV16S1A1N1A0A5B0 115 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 SYNDIG1LA6NDD5 238 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 G3V2L1 256 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 FOXE1O00358 373 aaPredicted RBP9.57□□□□□ -0.88
NEK4-204ENST00000487068 ETHE1O95571 254 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 PDYNP01213 254 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 NR2F6P10588 404 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 COX7A2P14406 83 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 TNNI3P19429 210 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 PPP2R1BP30154 601 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 CD97P48960 835 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 NAGLUP54802 743 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 PKNOX1P55347 436 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 ID2Q02363 134 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 ASPHQ12797 758 aa9.57□□□□□ -0.88
NEK4-204ENST00000487068 MFAP5Q13361 173 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms