RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZNF8P17098 575 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 NELFEP18615 380 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 MAPK9P45984 424 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 LEPRP48357 1165 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 COMPP49747 757 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ARSEP51690 589 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 GFERP55789 205 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 FOXL2P58012 376 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ERVFC1-1P60608 527 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 SLC25A11Q02978 314 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 NIPAL4Q0D2K0 466 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 KLHL30Q0D2K2 578 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 KIF5AQ12840 1032 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 PAFAH1B3Q15102 231 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ANKRD20A8PQ5CZ79 823 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 CCDC183Q5T5S1 534 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 FHL5Q5TD97 284 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 PDPK2PQ6A1A2 396 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 TXNRD3NBQ6F5E7 133 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 SASS6Q6UVJ0 657 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ABRAXAS1Q6UWZ7 409 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 WASH2PQ6VEQ5 465 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 CLEC17AQ6ZS10 378 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 PRSS42Q7Z5A4 293 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ADGRG6Q86SQ4 1221 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 RASGRP3Q8IV61 690 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 NIPA2Q8N8Q9 360 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 LPCAT1Q8NF37 534 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 THAP4Q8WY91 577 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 HSPH1Q92598 858 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 EID2BQ96D98 161 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 STAMBPL1Q96FJ0 436 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 OR6C1Q96RD1 312 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 WDR77Q9BQA1 342 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 TIMM29Q9BSF4 260 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ZSCAN5AQ9BUG6 496 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 MLPHQ9BV36 600 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 SPATA16Q9BXB7 569 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 POLDIP3Q9BY77 421 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 XPO4Q9C0E2 1151 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 TWSG1Q9GZX9 223 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 OR2AG1Q9H205 316 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 PCDH9Q9HC56 1237 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF304Q9HCX3 659 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 PDE7BQ9NP56 450 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 SLC40A1Q9NP59 571 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 LHX9Q9NQ69 397 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 WASH6PQ9NQA3 447 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 OGFRQ9NZT2 677 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF624Q9P2J8 865 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 NFKBIL1Q9UBC1 381 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 SLC23A2Q9UGH3 650 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 DTX4Q9Y2E6 619 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 DOCK10Q96BY6 2186 aa3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-205ENST00000486941 FER1L5A0AVI2 2057 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 LOC105369274A0A096LPK9 316 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 LOC102723532A0A0G2JNH3 316 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 SPRY3O43610 288 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 KIF1CO43896 1103 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 VEGFDO43915 354 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 MFSD11O43934 449 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 MTA2O94776 668 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 CDK14O94921 469 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 DDAH2O95865 285 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 CYP1A2P05177 515 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 HLA-DQB2P05538 268 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 MMP2P08253 660 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 ITGA5P08648 1049 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 CD48P09326 243 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 SKILP12757 684 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 IGFBP2P18065 325 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 EGR1P18146 543 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 NR1D1P20393 614 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 IDSP22304 550 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 GNLYP22749 145 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 PTPN4P29074 926 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 CASP14P31944 242 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 CAPZBP47756 277 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 GAS1P54826 345 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 DCDC1P59894 354 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 RPS15P62841 145 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 PDE1BQ01064 536 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 ACY1Q03154 408 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 DPYSL3Q14195 570 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 GPR18Q14330 331 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 PDK2Q15119 407 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 STX1AQ16623 288 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 HADHQ16836 314 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 P3H1Q32P28 736 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 FILIP1LQ4L180 1135 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 TDRD12Q587J7 1177 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF569Q5MCW4 686 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 NCBP2-AS2Q69YL0 99 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 PWWP2BQ6NUJ5 590 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 KLHL35Q6PF15 583 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 SYVN1Q86TM6 617 aa3.82□□□□□ -1.8
SNRNP40-205ENST00000486941 TMEM135Q86UB9 458 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms