RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CLHC1Q8NHS4 586 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.07□□□□□ -0.48
HDAC6-229ENST00000486665 NUDT8Q8WV74 236 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 MVB12AQ96EY5 273 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 SLC45A3Q96JT2 553 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 EGLN2Q96KS0 407 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 NPLQ9BXD5 320 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-229ENST00000486665 ULBP3Q9BZM4 244 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 ZNF304Q9HCX3 659 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 ASIC5Q9NY37 505 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 HCN3Q9P1Z3 774 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 FBXW2Q9UKT8 454 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 CDC14AQ9UNH5 594 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 EIF3LQ9Y262 564 aaKnown RBP12.07□□□□□ -0.48
HDAC6-229ENST00000486665 ATG4BQ9Y4P1 393 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 GPR45Q9Y5Y3 372 aa12.07□□□□□ -0.48
HDAC6-229ENST00000486665 A0A088AWK7 358 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 GNG14A0A1W2PPG7 69 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 A0A1W2PR48 441 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 ARHGAP10A1A4S6 786 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 WASHC1A8K0Z3 465 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 FAM227AF5H4B4 570 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 UBDO15205 165 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 NVLO15381 856 aaKnown RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 PRKRAO75569 313 aaKnown RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 DLGAP3O95886 979 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 ONECUT2O95948 504 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 ZNF10P21506 573 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 RBMS1P29558 406 aaKnown RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 MAPK12P53778 367 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 NME5P56597 212 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 TAS2R50P59544 299 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 DCDP81605 110 aaKnown RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 MC1RQ01726 317 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 ERV3-1Q14264 604 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 SLC9A5Q14940 896 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 NKAIN1Q4KMZ8 207 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 TMEM164Q5U3C3 297 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 C18orf63Q68DL7 685 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 FAM199XQ6PEV8 388 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 GPR180Q86V85 440 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 TMEM151BQ8IW70 566 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 OR51Q1Q8NH59 317 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 PROKR1Q8TCW9 393 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 LRFN5Q96NI6 719 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 TSSK3Q96PN8 268 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 CSF3RQ99062 836 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 YIPF2Q9BWQ6 316 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 B3GNT4Q9C0J1 378 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 LYRM4Q9HD34 91 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 AIG1Q9NVV5 245 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 TEX10Q9NXF1 929 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 NOP53Q9NZM5 478 aaKnown RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 HEY2Q9UBP5 337 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 DAPP1Q9UN19 280 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 EXO1Q9UQ84 846 aaKnown RBP12.06□□□□□ -0.48
HDAC6-229ENST00000486665 SCN3AQ9NY46 2000 aa12.06□□□□□ -0.48
HDAC6-229ENST00000486665 CDRT15L2A8MXV6 281 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 J3QKU1 62 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 CYR61O00622 381 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 PGRMC2O15173 223 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 PROM1O43490 865 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 JRKO75564 520 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 LRATO95237 230 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 IL3P08700 152 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 PRPS2P11908 318 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 ACPPP15309 386 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 CD1EP15812 388 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 FBLP22087 321 aaKnown RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 MAPK1P28482 360 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 HNRNPFP52597 415 aaKnown RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 TRA2BP62995 288 aaKnown RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 RHDQ02161 417 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 C2orf80Q0P641 193 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 ABHD18Q0P651 414 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 MAD2L1Q13257 205 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 DSG2Q14126 1118 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 PTGR1Q14914 329 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 PRSS53Q2L4Q9 553 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 BROXQ5VW32 411 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 FAM71E1Q6IPT2 247 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 NIPAL1Q6NVV3 410 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 IGF2-ASQ6U949 168 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 C6orf15Q6UXA7 325 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 CLNKQ7Z7G1 428 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 TMEM52Q8NDY8 209 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 CDC26Q8NHZ8 85 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 BCAS4Q8TDM0 211 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 SNRNP27Q8WVK2 155 aaKnown RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 MR1Q95460 341 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 GFM2Q969S9 779 aaKnown RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 PEX11GQ96HA9 241 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 CHST8Q9H2A9 424 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 ACTL8Q9H568 366 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 ZNF385DQ9H6B1 395 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 CLK4Q9HAZ1 481 aaKnown RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 THSD1Q9NS62 852 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms