RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ANKRD20A2Q5SQ80 823 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 DCST1Q5T197 706 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 ANKRD20A1Q5TYW2 823 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 ANKRD20A3Q5VUR7 823 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 VASNQ6EMK4 673 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 ITPRIPL1Q6GPH6 555 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 SYDE1Q6ZW31 735 aaPredicted RBP7.53□□□□□ -1.2
XRN1-212ENST00000486211 ZNF534Q76KX8 674 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 ASPGQ86U10 573 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 PM20D2Q8IYS1 436 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 ZNF611Q8N823 705 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 CAMKVQ8NCB2 501 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 FBXO15Q8NCQ5 510 aaPredicted RBP7.53□□□□□ -1.2
XRN1-212ENST00000486211 ZNF740Q8NDX6 193 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 OR13J1Q8NGT2 312 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 ZNF480Q8WV37 535 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 SKA2Q8WVK7 121 aaPredicted RBP7.53□□□□□ -1.2
XRN1-212ENST00000486211 SLC44A1Q8WWI5 657 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 SREK1Q8WXA9 508 aaKnown RBP7.53□□□□□ -1.2
XRN1-212ENST00000486211 ZMYND19Q96E35 227 aaPredicted RBP7.53□□□□□ -1.2
XRN1-212ENST00000486211 WDYHV1Q96HA8 205 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 PDLIM2Q96JY6 352 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 PKP4Q99569 1192 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 CCDC77Q9BR77 488 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 MED18Q9BUE0 208 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 PIGMQ9H3S5 423 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 SAMD15Q9P1V8 674 aa7.53□□□□□ -1.2
XRN1-212ENST00000486211 YLPM1P49750 1951 aaKnown RBP7.53□□□□□ -1.2
XRN1-212ENST00000486211 FREM3P0C091 2139 aa7.52□□□□□ -1.2
XRN1-212ENST00000486211 FREM1Q5H8C1 2179 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 LRRC14BA6NHZ5 514 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 HACD1B0YJ81 288 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 HS3ST1O14792 307 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 KPNA5O15131 536 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 SLC16A8O95907 504 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 GOT2P00505 430 aaKnown RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 PLAUP00749 431 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 IGHV4-39P01824 125 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 RBL1P28749 1068 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 CPOXP36551 454 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 CASP9P55211 416 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 EIF3BP55884 814 aaKnown RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 RPS4XP62701 263 aaKnown RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 VLDLRP98155 873 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 TFDP2Q14188 446 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 SF3B4Q15427 424 aaKnown RBP eCLIP7.52□□□□□ -1.218e-7■■□□□ 12.3
XRN1-212ENST00000486211 DEFB134Q4QY38 66 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 NHSL2Q5HYW2 709 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 LCE3BQ5TA77 95 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 MEI1Q5TIA1 1274 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 LIPNQ5VXI9 398 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 ZNF704Q6ZNC4 412 aaPredicted RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 SH2D5Q6ZV89 423 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 IL17RELQ6ZVW7 336 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 ZNF550Q7Z398 422 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 SCUBE1Q8IWY4 988 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 SLC13A3Q8WWT9 602 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 ANKRD9Q96BM1 317 aaPredicted RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 HAUS1Q96CS2 278 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 C1orf159Q96HA4 380 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 ART5Q96L15 291 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 FOPNLQ96NB1 174 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 ZFP3Q96NJ6 502 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 NSUN5Q96P11 429 aaKnown RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 PNO1Q9NRX1 252 aaKnown RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 TMEM184CQ9NVA4 438 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 PIH1D1Q9NWS0 290 aaKnown RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 CTTNBP2NLQ9P2B4 639 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 UVRAGQ9P2Y5 699 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 PACSIN3Q9UKS6 424 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 BOKQ9UMX3 212 aaPredicted RBP7.52□□□□□ -1.21
XRN1-212ENST00000486211 NENFQ9UMX5 172 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 CAMK2AQ9UQM7 478 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 SH2B3Q9UQQ2 575 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 LAMP3Q9UQV4 416 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 NBEAL2Q6ZNJ1 2754 aa7.52□□□□□ -1.21
XRN1-212ENST00000486211 PRKDCP78527 4128 aaKnown RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 PRMT5O14744 637 aaPredicted RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 KLF4O43474 513 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 PSIP1O75475 530 aaKnown RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 TNFSF13O75888 250 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 RCBTB2O95199 551 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 ALOX12P18054 663 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 IGFBP5P24593 272 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 UGT2B10P36537 528 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 CD79BP40259 229 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 MTTPP55157 894 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 PRPSAP1Q14558 356 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 ZNF791Q3KP31 576 aaPredicted RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 HECTD2Q5U5R9 776 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 PRAMEF20Q5VT98 475 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 LRRC38Q5VT99 294 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 CAPN13Q6MZZ7 669 aaPredicted RBP7.51□□□□□ -1.21
XRN1-212ENST00000486211 OPN5Q6U736 354 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 AFTPHQ6ULP2 937 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 ADGRE4PQ86SQ3 457 aa7.51□□□□□ -1.21
XRN1-212ENST00000486211 LDB1Q86U70 411 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms