RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ZRSR2Q15696 482 aaKnown RBP16.49■□□□□ 0.23
COL6A1-204ENST00000486023 TSNAXIP1Q2TAA8 658 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 TTC19Q6DKK2 380 aaPredicted RBP16.49■□□□□ 0.23
COL6A1-204ENST00000486023 GFRALQ6UXV0 394 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 REPS1Q96D71 796 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 NSUN5Q96P11 429 aaKnown RBP16.49■□□□□ 0.23
COL6A1-204ENST00000486023 PSMG3-AS1Q96PY0 264 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 CCDC77Q9BR77 488 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 KCMF1Q9P0J7 381 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 ADGRE2Q9UHX3 823 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 ZNF180Q9UJW8 692 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 SLC5A6Q9Y289 635 aa16.49■□□□□ 0.23
COL6A1-204ENST00000486023 OR7A17O14581 309 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 LRRTM2O43300 516 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 UNC5CO95185 931 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 CLDN9O95484 217 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 CRYABP02511 175 aaKnown RBP16.48■□□□□ 0.23
COL6A1-204ENST00000486023 PTX3P26022 381 aaPredicted RBP16.48■□□□□ 0.23
COL6A1-204ENST00000486023 MST1P26927 711 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 PIK3CBP42338 1070 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 MAGEA12P43365 314 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 CYB561P49447 251 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 SLC25A25Q6KCM7 469 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 C16orf47Q6ZP98 133 aaPredicted RBP16.48■□□□□ 0.23
COL6A1-204ENST00000486023 TRMT10CQ7L0Y3 403 aaKnown RBP16.48■□□□□ 0.23
COL6A1-204ENST00000486023 GALNTL5Q7Z4T8 443 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 HORMAD2Q8N7B1 307 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 OR52B6Q8NGF0 335 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 DOK4Q8TEW6 326 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 NR4A3Q92570 626 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 SLX1AQ9BQ83 275 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 MRPL57Q9BQC6 102 aaKnown RBP16.48■□□□□ 0.23
COL6A1-204ENST00000486023 TSPAN10Q9H1Z9 355 aaPredicted RBP16.48■□□□□ 0.23
COL6A1-204ENST00000486023 LYRM4Q9HD34 91 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 SEMA4BQ9NPR2 832 aaPredicted RBP16.48■□□□□ 0.23
COL6A1-204ENST00000486023 SEC14L3Q9UDX4 400 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 TBK1Q9UHD2 729 aa16.48■□□□□ 0.23
COL6A1-204ENST00000486023 GOLGA8RI6L899 631 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 PLPP1O14494 284 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 FCHO1O14526 889 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 PRKRAO75569 313 aaKnown RBP16.47■□□□□ 0.23
COL6A1-204ENST00000486023 GBAP04062 536 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 SP1P08047 785 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 COL6A2P12110 1019 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 GP1BBP13224 206 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 MLF1P58340 268 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 E2F2Q14209 437 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 SLC29A2Q14542 456 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 INAQ16352 499 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 C18orf63Q68DL7 685 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 CYP20A1Q6UW02 462 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.47■□□□□ 0.23
COL6A1-204ENST00000486023 TMEM132CQ8N3T6 1108 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 TMEM156Q8N614 296 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 APCDD1LQ8NCL9 501 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 MDS2Q8NDY4 140 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 ISL2Q96A47 359 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 PPWD1Q96BP3 646 aaKnown RBP16.47■□□□□ 0.23
COL6A1-204ENST00000486023 VMP1Q96GC9 406 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 OR8D2Q9GZM6 311 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 MRPL46Q9H2W6 279 aaKnown RBP16.47■□□□□ 0.23
COL6A1-204ENST00000486023 ADAP2Q9NPF8 381 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 SH3BGRL2Q9UJC5 107 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 TMCO1Q9UM00 188 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 CLDN16Q9Y5I7 305 aa16.47■□□□□ 0.23
COL6A1-204ENST00000486023 USP9YO00507 2555 aaPredicted RBP16.46■□□□□ 0.23
COL6A1-204ENST00000486023 C17orf105B2RV13 164 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 H0YIV9 168 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 NEURL1O76050 574 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 WISP2O76076 250 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 ZFAND5O76080 213 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 GCAP28676 217 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 CDH13P55290 713 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 PCDH1Q08174 1060 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 ELAVL1Q15717 326 aaKnown RBP16.46■□□□□ 0.23
COL6A1-204ENST00000486023 C1QL3Q5VWW1 255 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 MILR1Q7Z6M3 343 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 GPR180Q86V85 440 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 FJX1Q86VR8 437 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 TMEM178AQ8NBL3 297 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 DNAJB8Q8NHS0 232 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 TMEM125Q96AQ2 219 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 ZNF223Q9UK11 482 aaPredicted RBP16.46■□□□□ 0.23
COL6A1-204ENST00000486023 PCTPQ9UKL6 214 aa16.46■□□□□ 0.23
COL6A1-204ENST00000486023 TRGV8A0A0C4DH27 118 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 IQANK1A0A1B0GTG1 560 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ARHGAP10A1A4S6 786 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 GLOD5A6NK44 160 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 WASHC1A8K0Z3 465 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 STX16-NPEPL1H3BU86 382 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 STX16O14662 325 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 PRKNO60260 465 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 UGDHO60701 494 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 EEDO75530 441 aaKnown RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ITGA10O75578 1167 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 SLC25A12O75746 678 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ETHE1O95571 254 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 DDAH2O95865 285 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ABHD2P08910 425 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms