RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TMEM151AQ8N4L1 468 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 TMEM52Q8NDY8 209 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 C7orf57Q8NEG2 295 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 OR2W6PQ8NHA6 318 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 WDR20Q8TBZ3 569 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 SNRNP40Q96DI7 357 aaKnown RBP11.72□□□□□ -0.53
PTCD1-205ENST00000485746 CCDC126Q96EE4 140 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 DEFB126Q9BYW3 111 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 WDR41Q9HAD4 459 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 ZBTB26Q9HCK0 441 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 AGPAT4Q9NRZ5 378 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 NMRK1Q9NWW6 199 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
PTCD1-205ENST00000485746 PSD3Q9NYI0 1048 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 SLC12A4Q9UP95 1085 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 STK38LQ9Y2H1 464 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 CLCA3PQ9Y6N3 262 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 ATRXP46100 2492 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 SCN3AQ9NY46 2000 aa11.72□□□□□ -0.53
PTCD1-205ENST00000485746 IGKV3D-11A0A0A0MRZ8 115 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 TRBV11-1A0A0K0K1C0 115 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 OR5H15A6NDH6 313 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 DYRK3O43781 588 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 LDB3O75112 727 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 CRCPO75575 148 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 KRT6AP02538 564 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 KRT6BP04259 564 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 KRT4P19013 534 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 PPP2R1BP30154 601 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 CRHR1P34998 444 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 KRT6CP48668 564 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 CLCN2P51788 898 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 HNRNPFP52597 415 aaKnown RBP11.71□□□□□ -0.53
PTCD1-205ENST00000485746 ARFIP1P53367 373 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 PRKAA2P54646 552 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 ID2Q02363 134 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 OC90Q02509 493 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-205ENST00000485746 RASA2Q15283 850 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 GGTA1PQ4G0N0 100 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 LETMD1Q6P1Q0 360 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 WDR93Q6P2C0 686 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 GPRIN3Q6ZVF9 776 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 RPS19BP1Q86WX3 136 aaKnown RBP11.71□□□□□ -0.53
PTCD1-205ENST00000485746 NUDT13Q86X67 352 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 SCUBE1Q8IWY4 988 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 C4orf33Q8N1A6 199 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 BEST3Q8N1M1 668 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 KIF2BQ8N4N8 673 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 CDYL2Q8N8U2 506 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 MYRIPQ8NFW9 859 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 METTL6Q8TCB7 284 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 MZB1Q8WU39 189 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 DAZLQ92904 295 aaKnown RBP11.71□□□□□ -0.53
PTCD1-205ENST00000485746 C19orf60Q96EN9 201 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 TMEM237Q96Q45 408 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 UTP23Q9BRU9 249 aaKnown RBP11.71□□□□□ -0.53
PTCD1-205ENST00000485746 PARD6BQ9BYG5 372 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 RPF2Q9H7B2 306 aaKnown RBP11.71□□□□□ -0.53
PTCD1-205ENST00000485746 ADAP2Q9NPF8 381 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 KCMF1Q9P0J7 381 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 TRPS1Q9UHF7 1281 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 PCDHGA10Q9Y5H3 936 aa11.71□□□□□ -0.53
PTCD1-205ENST00000485746 KALRNO60229 2985 aa11.71□□□□□ -0.54
PTCD1-205ENST00000485746 TNRC6AQ8NDV7 1962 aaKnown RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 COL6A6A6NMZ7 2263 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 CCDC151A5D8V7 595 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 GABRR3A8MPY1 467 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 PPP6CO00743 305 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 FCHO1O14526 889 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 SCELO95171 688 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 PDYNP01213 254 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 GBAP04062 536 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 KLK1P06870 262 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 FAM58BPP0C7Q3 252 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 COX7A2P14406 83 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ST13P50502 369 aaKnown RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ELAVL1Q15717 326 aaKnown RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 CCNYL2Q5T2Q4 361 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 H3F3CQ6NXT2 135 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 FAM180AQ6UWF9 173 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ZYG11AQ6WRX3 759 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 OR4N5Q8IXE1 308 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ZCCHC7Q8N3Z6 543 aaKnown RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 RIBC1Q8N443 379 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 HORMAD2Q8N7B1 307 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 GALNT11Q8NCW6 608 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 B3GNT7Q8NFL0 401 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ELP5Q8TE02 316 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 AENQ8WTP8 325 aaKnown RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 THAP3Q8WTV1 239 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 TANKQ92844 425 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 NCLNQ969V3 563 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 VMP1Q96GC9 406 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 RBM18Q96H35 190 aaKnown RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 DGAT2Q96PD7 388 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 C1QTNF3Q9BXJ4 246 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ROPN1BQ9BZX4 212 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-205ENST00000485746 RNF32Q9H0A6 362 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ROPN1Q9HAT0 212 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms