RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 COQ8BQ96D53 544 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 CATSPER2Q96P56 530 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 CSF3RQ99062 836 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 FAM117AQ9C073 453 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 COPS7BQ9H9Q2 264 aaPredicted RBP14.93□□□□□ -0.02
APOE-205ENST00000485628 MKKSQ9NPJ1 570 aaPredicted RBP14.93□□□□□ -0.02
APOE-205ENST00000485628 ZIM2Q9NZV7 527 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 PHF11Q9UIL8 331 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 SCN2AQ99250 2005 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 AKAP13Q12802 2813 aa14.93□□□□□ -0.02
APOE-205ENST00000485628 CROCCQ5TZA2 2017 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 TEX51A0A1B0GUA7 166 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 GNG14A0A1W2PPG7 69 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 BLACEA4D250 179 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 FAM227AF5H4B4 570 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 GUCY1B2O75343 617 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 AIFM1O95831 613 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 RECKO95980 971 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 ADRB1P08588 477 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 IL3P08700 152 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 PIM1P11309 404 aaPredicted RBP14.92□□□□□ -0.02
APOE-205ENST00000485628 CD1EP15812 388 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 DDCP20711 480 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 PRPS1L1P21108 318 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 FBLP22087 321 aaKnown RBP14.92□□□□□ -0.02
APOE-205ENST00000485628 HNRNPFP52597 415 aaKnown RBP14.92□□□□□ -0.02
APOE-205ENST00000485628 UFM1P61960 85 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 IGLV3-21P80748 117 aaPredicted RBP14.92□□□□□ -0.02
APOE-205ENST00000485628 CBX1P83916 185 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 SHC2P98077 582 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 MC1RQ01726 317 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 FOXC1Q12948 553 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 UGT8Q16880 541 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 C6orf15Q6UXA7 325 aaPredicted RBP14.92□□□□□ -0.02
APOE-205ENST00000485628 ZC3H7AQ8IWR0 971 aaKnown RBP14.92□□□□□ -0.02
APOE-205ENST00000485628 SCUBE1Q8IWY4 988 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 FAM9CQ8IZT9 166 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 MMP21Q8N119 569 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 METTL27Q8N6F8 245 aaPredicted RBP14.92□□□□□ -0.02
APOE-205ENST00000485628 TESCQ96BS2 214 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 MTERF3Q96E29 417 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 MARK4Q96L34 752 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 RILPQ96NA2 401 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 TSSK3Q96PN8 268 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 NMUR2Q9GZQ4 415 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 CLMPQ9H6B4 373 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 WDR54Q9H977 334 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 HCN3Q9P1Z3 774 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 NDOR1Q9UHB4 597 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 PADI1Q9ULC6 663 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 TRIM33Q9UPN9 1127 aa14.92□□□□□ -0.02
APOE-205ENST00000485628 IGKV3D-11A0A0A0MRZ8 115 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 ARHGAP10A1A4S6 786 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 C1orf226A1L170 272 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 WASHC1A8K0Z3 465 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 GABRR3A8MPY1 467 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 PGRMC2O15173 223 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 SLC22A2O15244 555 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 SCN2BO60939 215 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 KLF7O75840 302 aaPredicted RBP14.91□□□□□ -0.02
APOE-205ENST00000485628 CAPNS1P04632 268 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 KLK3P07288 261 aaPredicted RBP14.91□□□□□ -0.02
APOE-205ENST00000485628 FHP07954 510 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 RAB40ALP0C0E4 278 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 FRKP42685 505 aaPredicted RBP14.91□□□□□ -0.02
APOE-205ENST00000485628 PHC1P78364 1004 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 SQLEQ14534 574 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 NKG7Q16617 165 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 MPEG1Q2M385 716 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 FAM91A1Q658Y4 838 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 CPZQ66K79 652 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 SLC48A1Q6P1K1 146 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 FOXR1Q6PIV2 292 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 LAPTM4BQ86VI4 370 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 TMEM151BQ8IW70 566 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 ZNF595Q8IYB9 648 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 KRTCAP2Q8N6L1 136 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 NUDT8Q8WV74 236 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 COL26A1Q96A83 441 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 ANKRD9Q96BM1 317 aaPredicted RBP14.91□□□□□ -0.02
APOE-205ENST00000485628 TBC1D20Q96BZ9 403 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 RNF31Q96EP0 1072 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 PEX11GQ96HA9 241 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 SLC45A3Q96JT2 553 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 ZNF681Q96N22 645 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 ZNF578Q96N58 590 aaPredicted RBP14.91□□□□□ -0.02
APOE-205ENST00000485628 SPSB2Q99619 263 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 CCDC106Q9BWC9 280 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 CHST8Q9H2A9 424 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 REEP4Q9H6H4 257 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 MRGBPQ9NV56 204 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 CTSFQ9UBX1 484 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 ZNF282Q9UDV7 671 aaPredicted RBP14.91□□□□□ -0.02
APOE-205ENST00000485628 FBXW2Q9UKT8 454 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 MAPRE3Q9UPY8 281 aa14.91□□□□□ -0.02
APOE-205ENST00000485628 CAPN14A8MX76 684 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 TGFBR3LH3BV60 316 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 NDUFAB1O14561 156 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 SCAMP2O15127 329 aaKnown RBP14.9□□□□□ -0.02
APOE-205ENST00000485628 BRINP1O60477 761 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms