RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 HDAC3O15379 428 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 B4GALT2O60909 372 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 SEC22BO75396 215 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 CDC123O75794 336 aaPredicted RBP18.75■□□□□ 0.59
COL6A2-208ENST00000485591 HEXBP07686 556 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 MMP11P24347 488 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 BUD31P41223 144 aaPredicted RBP18.75■□□□□ 0.59
COL6A2-208ENST00000485591 EMP2P54851 167 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 TRA2BP62995 288 aaKnown RBP18.75■□□□□ 0.59
COL6A2-208ENST00000485591 RHAGQ02094 409 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 CDC20Q12834 499 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 INO80CQ6PI98 192 aaPredicted RBP18.75■□□□□ 0.59
COL6A2-208ENST00000485591 RAB43Q86YS6 212 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 ZNF595Q8IYB9 648 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 FCRL1Q96LA6 429 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 VTI1BQ9UEU0 232 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 TMED5Q9Y3A6 229 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 MMACHCQ9Y4U1 282 aa18.75■□□□□ 0.59
COL6A2-208ENST00000485591 PCSK5Q92824 1860 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 ATP6AP2A0A1C7CYW4 349 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 CLDN4O14493 209 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 NKX2-8O15522 239 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 PROM1O43490 865 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 GUCY1B2O75343 617 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 ATP6AP2O75787 350 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 MYO1DO94832 1006 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 NR2F6P10588 404 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 KITP10721 976 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 OTX2P32243 289 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 GSTM5P46439 218 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 HNRNPFP52597 415 aaKnown RBP18.74■□□□□ 0.59
COL6A2-208ENST00000485591 HSD17B7P56937 341 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 RPL38P63173 70 aaKnown RBP18.74■□□□□ 0.59
COL6A2-208ENST00000485591 VAC14Q08AM6 782 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 GALNTL6Q49A17 601 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 ATP6AP1LQ52LC2 224 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 PPP1R32Q7Z5V6 425 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 TMEM52Q8NDY8 209 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 PLPP5Q8NEB5 264 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 EBPLQ9BY08 206 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 NUF2Q9BZD4 464 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 MEAF6Q9HAF1 191 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 CPNE5Q9HCH3 593 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 PRDM9Q9NQV7 894 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 PRTFDC1Q9NRG1 225 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 TEX10Q9NXF1 929 aaPredicted RBP18.74■□□□□ 0.59
COL6A2-208ENST00000485591 ACACBO00763 2458 aa18.74■□□□□ 0.59
COL6A2-208ENST00000485591 GNG14A0A1W2PPG7 69 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 A0A1W2PR48 441 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 CDC14CA4D256 554 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 TRPC5OSA6NMA1 111 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 PRMT3O60678 531 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 ALOX12BO75342 701 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 AIFM1O95831 613 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 ANXA4P09525 319 aaPredicted RBP18.73■□□□□ 0.59
COL6A2-208ENST00000485591 TLX1P31314 330 aaPredicted RBP18.73■□□□□ 0.59
COL6A2-208ENST00000485591 ZNF763Q0D2J5 394 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 RFTN2Q52LD8 501 aaPredicted RBP18.73■□□□□ 0.59
COL6A2-208ENST00000485591 C18orf63Q68DL7 685 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 NOXRED1Q6NXP6 359 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 TMEM205Q6UW68 189 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 FAM47EQ6ZV65 393 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 MRGPREQ86SM8 312 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 WDR75Q8IWA0 830 aaKnown RBP18.73■□□□□ 0.59
COL6A2-208ENST00000485591 SCUBE1Q8IWY4 988 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 LRRC34Q8IZ02 419 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 SNRNP27Q8WVK2 155 aaKnown RBP18.73■□□□□ 0.59
COL6A2-208ENST00000485591 TM4SF18Q96CE8 201 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 TUBGCP3Q96CW5 907 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 IP6K3Q96PC2 410 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 CCDC134Q9H6E4 229 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 WDR41Q9HAD4 459 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 POLR3HQ9Y535 204 aaPredicted RBP18.73■□□□□ 0.59
COL6A2-208ENST00000485591 HS3ST3B1Q9Y662 390 aa18.73■□□□□ 0.59
COL6A2-208ENST00000485591 IGKV3D-11A0A0A0MRZ8 115 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 A0A1W2PQ72 361 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 OR2W5A6NFC9 320 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 PEX11AO75192 247 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 VPS4BO75351 444 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 FURINP09958 794 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 PRR35P0CG20 571 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 C8orf89P0DMQ9 161 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 PRKAR1AP10644 381 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 ACPPP15309 386 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 MDH1P40925 334 aaKnown RBP18.72■□□□□ 0.59
COL6A2-208ENST00000485591 BTG2P78543 158 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 GUCY1A3Q02108 690 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 ST3GAL2Q16842 350 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 SMU1Q2TAY7 513 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 C6orf136Q5SQH8 315 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 ATP1A1-AS1Q5TC04 95 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 NDUFAF5Q5TEU4 345 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 METTL21AQ8WXB1 218 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 THAP4Q8WY91 577 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 PPP1R36Q96LQ0 422 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 RPF2Q9H7B2 306 aaKnown RBP18.72■□□□□ 0.59
COL6A2-208ENST00000485591 GIMAP2Q9UG22 337 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 DLGAP4Q9Y2H0 992 aa18.72■□□□□ 0.59
COL6A2-208ENST00000485591 MAP1BP46821 2468 aaKnown RBP18.72■□□□□ 0.59
COL6A2-208ENST00000485591 LOC102723996A0A087X1L8 192 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms