RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SHC2P98077 582 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 DPY19L1Q2PZI1 675 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 ZNF750Q32MQ0 723 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 GARNL3Q5VVW2 1013 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 TTLL10Q6ZVT0 673 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 KIAA2013Q8IYS2 634 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 DEFB107AQ8IZN7 70 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 FAM47BQ8NA70 645 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 SLC38A9Q8NBW4 561 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 CLPTM1LQ96KA5 538 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 CDC6Q99741 560 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 GPATCH1Q9BRR8 931 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 RBCK1Q9BYM8 510 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 ROGDIQ9GZN7 287 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 ANKHQ9HCJ1 492 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 MIEF1Q9NQG6 463 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 LYARQ9NX58 379 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 PACSIN3Q9UKS6 424 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 MAN2B2Q9Y2E5 1009 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 NUP214P35658 2090 aaPredicted RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 TRBV5-3A0A0A0MS03 114 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 DYTNA2CJ06 578 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 CYR61O00622 381 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 GYG2O15488 501 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 TBX19O60806 448 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 NSA2O95478 260 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 PCSK2P16519 638 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 CCKBRP32239 447 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 GSTM5P46439 218 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 EMP3P54852 163 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 SRSF11Q05519 484 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 FOXM1Q08050 763 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 HEPACAMQ14CZ8 416 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 MAPKAPK3Q16644 382 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 TRMT5Q32P41 509 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 CDCP2Q5VXM1 449 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 RBM44Q6ZP01 1051 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 GLRX5Q86SX6 157 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 SLCO6A1Q86UG4 719 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 EXOSC8Q96B26 276 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 MTERF3Q96E29 417 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 BHLHE41Q9C0J9 482 aaPredicted RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 PAIP1Q9H074 479 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 WDR41Q9HAD4 459 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 LYRM4Q9HD34 91 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 VAPAQ9P0L0 249 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 GMPR2Q9P2T1 348 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 WBP11Q9Y2W2 641 aaKnown RBP13.73□□□□□ -0.21
LRIF1-202ENST00000485275 MAU2Q9Y6X3 613 aa13.73□□□□□ -0.21
LRIF1-202ENST00000485275 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 EFCAB7A8K855 629 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 GSC2O15499 205 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 GSNP06396 782 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 KRT16P08779 473 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 NR2F6P10588 404 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 PTGER1P34995 402 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 MNAT1P51948 309 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 SIM1P81133 766 aaPredicted RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 ACY1Q03154 408 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 ACTN3Q08043 901 aaPredicted RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 ILKQ13418 452 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 GAB1Q13480 694 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 TRA2AQ13595 282 aaKnown RBP eCLIP13.72□□□□□ -0.213e-8■■■■□ 21.3
LRIF1-202ENST00000485275 NFYCQ13952 458 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 SELPLGQ14242 412 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 TRIP6Q15654 476 aaKnown RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 PWWP2BQ6NUJ5 590 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 SLC48A1Q6P1K1 146 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 DHRS13Q6UX07 377 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 HACD2Q6Y1H2 254 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 PGAM4Q8N0Y7 254 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 TTC29Q8NA56 475 aaPredicted RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 STARD8Q92502 1023 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 CNRIP1Q96F85 164 aaPredicted RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 ZNF764Q96H86 408 aaPredicted RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 CTRCQ99895 268 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 IKZF5Q9H5V7 419 aa13.72□□□□□ -0.21
LRIF1-202ENST00000485275 ACTR5Q9H9F9 607 aaPredicted RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 FAM120CQ9NX05 1096 aaKnown RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.72□□□□□ -0.21
LRIF1-202ENST00000485275 A0A088AWK7 358 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 C1orf226A1L170 272 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 CHST10O43529 356 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 DNAJC8O75937 253 aaPredicted RBP13.71□□□□□ -0.21
LRIF1-202ENST00000485275 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 DRD2P14416 443 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.21
LRIF1-202ENST00000485275 CPN2P22792 545 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 FRKP42685 505 aaPredicted RBP13.71□□□□□ -0.21
LRIF1-202ENST00000485275 OR1D4P47884 311 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 PCBP4P57723 403 aaKnown RBP13.71□□□□□ -0.21
LRIF1-202ENST00000485275 DMTNQ08495 405 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 ART3Q13508 389 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 NDUFA9Q16795 377 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms