RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 NUDT13Q86X67 352 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 METTL4Q8N3J2 472 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 MTFMTQ96DP5 389 aaKnown RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 CNDP1Q96KN2 507 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 LPAR4Q99677 370 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 MAPKAP1Q9BPZ7 522 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 GATA5Q9BWX5 397 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 PRTFDC1Q9NRG1 225 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 FARSBQ9NSD9 589 aaKnown RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 LYARQ9NX58 379 aaKnown RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 A6NL46 340 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 B8ZZF3 427 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 MASP2O00187 686 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 TM9SF1O15321 606 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 EEDO75530 441 aaKnown RBP16.68■□□□□ 0.26
SREBF1-213ENST00000485080 ALDH3A1P30838 453 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 SERPINB5P36952 375 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 HNRNPFP52597 415 aaKnown RBP16.68■□□□□ 0.26
SREBF1-213ENST00000485080 OR4D2P58180 307 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 TBL3Q12788 808 aaKnown RBP16.68■□□□□ 0.26
SREBF1-213ENST00000485080 BIKQ13323 160 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 SFT2D3Q587I9 215 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 AGAP7PQ5VUJ5 663 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 IRAK1BP1Q5VVH5 260 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 PAGE2Q7Z2X7 111 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 GPR180Q86V85 440 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 PARP9Q8IXQ6 854 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 TMEM52Q8NDY8 209 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 OR6Y1Q8NGX8 325 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 M1APQ8TC57 530 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 PSMF1Q92530 271 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 AGAP4Q96P64 663 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 CSF3RQ99062 836 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 SORBS1Q9BX66 1292 aaKnown RBP16.68■□□□□ 0.26
SREBF1-213ENST00000485080 STMN4Q9H169 189 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-213ENST00000485080 PRM3Q9NNZ6 103 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 MID1IP1Q9NPA3 183 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 NECTIN3Q9NQS3 549 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 ZNF71Q9NQZ8 489 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-213ENST00000485080 VPS29Q9UBQ0 182 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 PPIEQ9UNP9 301 aaKnown RBP16.68■□□□□ 0.26
SREBF1-213ENST00000485080 ASB4Q9Y574 426 aa16.68■□□□□ 0.26
SREBF1-213ENST00000485080 PROM1O43490 865 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 NPHS1O60500 1241 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 PRB1P04280 392 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 MYZAPP0CAP1 466 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 MAOAP21397 527 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 HMOX2P30519 316 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 ACTN3Q08043 901 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-213ENST00000485080 C19orf57Q0VDD7 668 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 PAPD4Q6PIY7 484 aaKnown RBP16.67■□□□□ 0.26
SREBF1-213ENST00000485080 RNF165Q6ZSG1 346 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 FAM47BQ8NA70 645 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 SREK1Q8WXA9 508 aaKnown RBP16.67■□□□□ 0.26
SREBF1-213ENST00000485080 TANKQ92844 425 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 THOC3Q96J01 351 aaKnown RBP16.67■□□□□ 0.26
SREBF1-213ENST00000485080 LMF1Q96S06 567 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 MMP25Q9NPA2 562 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 SIRT5Q9NXA8 310 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 ANAPC2Q9UJX6 822 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 SLC12A4Q9UP95 1085 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 ATG4BQ9Y4P1 393 aa16.67■□□□□ 0.26
SREBF1-213ENST00000485080 IGHV3-20A0A0C4DH32 117 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TGFBR3LH3BV60 316 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TMPRSS11DO60235 418 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 SEC24DO94855 1032 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-213ENST00000485080 BPGMP07738 259 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 FGF4P08620 206 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 FAM58BPP0C7Q3 252 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 DHRS4L1P0CG22 281 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 CPN2P22792 545 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TLX1P31314 330 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-213ENST00000485080 SOX11P35716 441 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 HNRNPH2P55795 449 aaKnown RBP16.66■□□□□ 0.26
SREBF1-213ENST00000485080 IGLV3-21P80748 117 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TNFRSF17Q02223 184 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 KLRB1Q12918 225 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 NFATC3Q12968 1075 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 SERTAD2Q14140 314 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 CASP8Q14790 479 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 SGO1Q5FBB7 561 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 CRB2Q5IJ48 1285 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TCHHL1Q5QJ38 904 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-213ENST00000485080 H3F3CQ6NXT2 135 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 CYP20A1Q6UW02 462 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TRIM46Q7Z4K8 759 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TM9SF4Q92544 642 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 C11orf24Q96F05 449 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-213ENST00000485080 PKNOX2Q96KN3 472 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 VTI1BQ9UEU0 232 aa16.66■□□□□ 0.26
SREBF1-213ENST00000485080 TNRC6AQ8NDV7 1962 aaKnown RBP16.66■□□□□ 0.26
SREBF1-213ENST00000485080 SAGE2PA6NJ88 616 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 NPIPB8E9PQR5 432 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 CDK2AP1O14519 115 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 BIRC5O15392 142 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 DPM1O60762 260 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 ZWINTO95229 277 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 UROSP10746 265 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 NR1D1P20393 614 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms