RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 MCUQ8NE86 351 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 GOT1L1Q8NHS2 421 aaPredicted RBP11.89□□□□□ -0.51
UBR4-213ENST00000483922 KIAA1191Q96A73 305 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 C18orf12Q96KH6 178 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 HIST1H2AHQ96KK5 128 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 HIST1H2AJQ99878 128 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 H2AFJQ9BTM1 129 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 PELI2Q9HAT8 420 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 TAS2R13Q9NYV9 303 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 SAMD15Q9P1V8 674 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 VTI1BQ9UEU0 232 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 ZKSCAN5Q9Y2L8 839 aa11.89□□□□□ -0.51
UBR4-213ENST00000483922 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 TRGV5A0A0B4J1U4 118 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 NRDCO43847 1150 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 CTNSO60931 367 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 BANF1O75531 89 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 CEACAM8P31997 349 aaPredicted RBP11.88□□□□□ -0.51
UBR4-213ENST00000483922 CXCR5P32302 372 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 GDF5P43026 501 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 RGS4P49798 205 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 LIM2P55344 173 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 AP1S2P56377 157 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 SARNPP82979 210 aaKnown RBP11.88□□□□□ -0.51
UBR4-213ENST00000483922 ELAVL1Q15717 326 aaKnown RBP11.88□□□□□ -0.51
UBR4-213ENST00000483922 ZNF791Q3KP31 576 aaPredicted RBP11.88□□□□□ -0.51
UBR4-213ENST00000483922 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 WLSQ5T9L3 541 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 DGAT2L6Q6ZPD8 337 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 SLCO4C1Q6ZQN7 724 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 GK5Q6ZS86 529 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 TMPRSS11BQ86T26 416 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 PALM2Q8IXS6 379 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 KLHDC8AQ8IYD2 350 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 ULK2Q8IYT8 1036 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 CIARTQ8N365 385 aaPredicted RBP11.88□□□□□ -0.51
UBR4-213ENST00000483922 GOLM1Q8NBJ4 401 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 LINC01560Q8TB33 94 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 ZNF721Q8TF20 911 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 FAM222BQ8WU58 562 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 CCDC77Q9BR77 488 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 NPLQ9BXD5 320 aaPredicted RBP11.88□□□□□ -0.51
UBR4-213ENST00000483922 ALOXE3Q9BYJ1 711 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 RBSNQ9H1K0 784 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 SLC6A15Q9H2J7 730 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 ADAP2Q9NPF8 381 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 MAD1L1Q9Y6D9 718 aa11.88□□□□□ -0.51
UBR4-213ENST00000483922 CUBNO60494 3623 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 ARHGAP21Q5T5U3 1957 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 URADA6NGE7 173 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 LRRC3CA6NJW4 275 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 HRKO00198 91 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 CDC7O00311 574 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 HCN1O60741 890 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 LY6G6DO95868 133 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 RAF1P04049 648 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 INHBBP09529 407 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 CD53P19397 219 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 BMP5P22003 454 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 TACR1P25103 407 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 ZNF136P52737 540 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 PLA2G16P53816 162 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 IL2P60568 153 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 ADPRMQ3LIE5 342 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 MSS51Q4VC12 460 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 PIGGQ5H8A4 983 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 UBE3DQ7Z6J8 389 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 TMEM132CQ8N3T6 1108 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 MORN4Q8NDC4 146 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 SLC2A12Q8TD20 617 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 CALML6Q8TD86 181 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 RNASE6Q93091 150 aaKnown RBP11.87□□□□□ -0.51
UBR4-213ENST00000483922 GAL3ST3Q96A11 431 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 SARAFQ96BY9 339 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 PDLIM5Q96HC4 596 aaKnown RBP11.87□□□□□ -0.51
UBR4-213ENST00000483922 SGCZQ96LD1 299 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 AIF1LQ9BQI0 150 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 OR8D2Q9GZM6 311 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 EPB41L4BQ9H329 900 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 XAB2Q9HCS7 855 aaKnown RBP11.87□□□□□ -0.51
UBR4-213ENST00000483922 PRDM7Q9NQW5 492 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 SACM1LQ9NTJ5 587 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 ZNF490Q9ULM2 529 aaPredicted RBP11.87□□□□□ -0.51
UBR4-213ENST00000483922 DAPP1Q9UN19 280 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.87□□□□□ -0.51
UBR4-213ENST00000483922 MPDZO75970 2070 aa11.87□□□□□ -0.51
UBR4-213ENST00000483922 COL6A5A8TX70 2615 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 ERI3O43414 337 aaKnown RBP11.86□□□□□ -0.51
UBR4-213ENST00000483922 LDB3O75112 727 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 EPPINO95925 133 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 IFNA16P05015 189 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 CCDC175P0C221 793 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 C1GALT1C1LP0DN25 315 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 GABRA1P14867 456 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 SAT1P21673 171 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 CERS1P27544 350 aa11.86□□□□□ -0.51
UBR4-213ENST00000483922 AGFG1P52594 562 aaKnown RBP11.86□□□□□ -0.51
UBR4-213ENST00000483922 ID2Q02363 134 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms