RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 A0A0J9YVX5 310 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 EFNA1P20827 205 aaPredicted RBP24.89■■□□□ 1.57
SHOX2-204ENST00000483851 UQCRC2P22695 453 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 FASP25445 335 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 BIRC2Q13490 618 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 NRF1Q16656 503 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 C14orf28Q4W4Y0 310 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 FAM98BQ52LJ0 330 aaKnown RBP24.89■■□□□ 1.57
SHOX2-204ENST00000483851 LYSMD4Q5XG99 296 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 MMP21Q8N119 569 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 OR52N2Q8NGI0 321 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 FAM162AQ96A26 154 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 PPWD1Q96BP3 646 aaKnown RBP24.89■■□□□ 1.57
SHOX2-204ENST00000483851 SLC38A3Q99624 504 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 CIB1Q99828 191 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 SLC35A5Q9BS91 424 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 PRDM9Q9NQV7 894 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 DCAF13Q9NV06 445 aaKnown RBP24.89■■□□□ 1.57
SHOX2-204ENST00000483851 KNL1Q8NG31 2342 aa24.89■■□□□ 1.57
SHOX2-204ENST00000483851 TP53BP1Q12888 1972 aaPredicted RBP24.89■■□□□ 1.57
SHOX2-204ENST00000483851 A0A0G2JN53 185 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 GNSP15586 552 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 CAPZBP47756 277 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 EPHA4P54764 986 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 INTS11Q5TA45 600 aaKnown RBP24.88■■□□□ 1.57
SHOX2-204ENST00000483851 ZCCHC8Q6NZY4 707 aaKnown RBP24.88■■□□□ 1.57
SHOX2-204ENST00000483851 ABHD13Q7L211 337 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 ZZZ3Q8IYH5 903 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 PACRGLQ8N7B6 248 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 KCT2Q8NC54 265 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 PSMA8Q8TAA3 256 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 CNBD2Q96M20 576 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 FCRL4Q96PJ5 515 aa24.88■■□□□ 1.57
SHOX2-204ENST00000483851 LAMTOR5O43504 91 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 RAP2AP10114 183 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 CKMT2P17540 419 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 SOX11P35716 441 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 MANFP55145 182 aaKnown RBP24.87■■□□□ 1.57
SHOX2-204ENST00000483851 RAB8AP61006 207 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 CARM1Q86X55 608 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 ZNF761Q86XN6 746 aaPredicted RBP24.87■■□□□ 1.57
SHOX2-204ENST00000483851 SERINC2Q96SA4 455 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 RAB33BQ9H082 229 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 SUSD2Q9UGT4 822 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 PDGFBP01127 241 aaPredicted RBP24.87■■□□□ 1.57
SHOX2-204ENST00000483851 PROS1P07225 676 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 PABPC4LP0CB38 370 aaKnown RBP24.87■■□□□ 1.57
SHOX2-204ENST00000483851 TYRP1P17643 537 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 CTSKP43235 329 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 PMS2CLQ68D20 193 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 TSSK4Q6SA08 328 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 NCLNQ969V3 563 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 NLNQ9BYT8 704 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 TRIM4Q9C037 500 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 MAGIXQ9H6Y5 334 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 SLC35C2Q9NQQ7 365 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 C1GALT1Q9NS00 363 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 ZSCAN32Q9NX65 697 aa24.87■■□□□ 1.57
SHOX2-204ENST00000483851 GOLGA4Q13439 2230 aaKnown RBP24.86■■□□□ 1.57
SHOX2-204ENST00000483851 CACNA1IQ9P0X4 2223 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 H0YGG7 62 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 SOCS2O14508 198 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 STATHP02808 62 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 CERS1P27544 350 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 RXRGP48443 463 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 CCT8P50990 548 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 ARF3P61204 181 aaPredicted RBP24.86■■□□□ 1.57
SHOX2-204ENST00000483851 BTN3A2P78410 334 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 CHRNB3Q05901 458 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 RBBP4Q09028 425 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 ADRM1Q16186 407 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 ZBTB49Q6ZSB9 765 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 PTOV1Q86YD1 416 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 EPHX4Q8IUS5 362 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 ZFP28Q8NHY6 868 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 GAB3Q8WWW8 586 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 CENPNQ96H22 339 aaPredicted RBP24.86■■□□□ 1.57
SHOX2-204ENST00000483851 PHF11Q9UIL8 331 aa24.86■■□□□ 1.57
SHOX2-204ENST00000483851 A0A1W2PR48 441 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 PROM1O43490 865 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 TNFAIP8O95379 198 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 ZNF888P0CJ79 500 aaPredicted RBP24.85■■□□□ 1.57
SHOX2-204ENST00000483851 PVRP15151 417 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 MVDP53602 400 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 DEFB133Q30KQ1 61 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 ZC3H12BQ5HYM0 836 aaKnown RBP24.85■■□□□ 1.57
SHOX2-204ENST00000483851 NHSL2Q5HYW2 709 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 FKBP9P1Q75LS8 142 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 EPB41L1Q9H4G0 881 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 UTS2RQ9UKP6 389 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 SAMD4AQ9UPU9 718 aaKnown RBP24.85■■□□□ 1.57
SHOX2-204ENST00000483851 ATG4BQ9Y4P1 393 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 A0A1B0GVT2 93 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 CDH3P22223 829 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 NETO1Q8TDF5 533 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 EXOSC8Q96B26 276 aaKnown RBP24.85■■□□□ 1.57
SHOX2-204ENST00000483851 TMEM38AQ9H6F2 299 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 EPS8L2Q9H6S3 715 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 SLAMF7Q9NQ25 335 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 C8orf4Q9NR00 106 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms