RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CCT8P50990 548 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 MANFP55145 182 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 SNRPNP63162 240 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 BTN3A2P78410 334 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 CHRNB3Q05901 458 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 RBBP4Q09028 425 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 C16orf72Q14CZ0 275 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 SUZ12Q15022 739 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 CEBPEQ15744 281 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 NKG7Q16617 165 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 C14orf28Q4W4Y0 310 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLK3-204ENST00000483723 SAXO2Q658L1 398 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 PPP4R4Q6NUP7 873 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 FAM86B1Q8N7N1 296 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 PNPT1Q8TCS8 783 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 EDAQ92838 391 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 EXOSC8Q96B26 276 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 PPWD1Q96BP3 646 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 RNF145Q96MT1 663 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 SERINC2Q96SA4 455 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 SEPHS2Q99611 448 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 RAB33BQ9H082 229 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 KLHL25Q9H0H3 589 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 TMEM38AQ9H6F2 299 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 COQ10BQ9H8M1 238 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 NEUROD4Q9HD90 331 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 PRDM9Q9NQV7 894 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 UCKL1Q9NWZ5 548 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 C5AR2Q9P296 337 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 CACNA1IQ9P0X4 2223 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 A0A1B0GTW7 788 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 A0A1B0GVT2 93 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 PGRMC2O15173 223 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 PRKD3O94806 890 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 AIFM1O95831 613 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 NTRK1P04629 796 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 PROS1P07225 676 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 NUDT7P0C024 238 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 GIMD1P0DJR0 217 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 ST6GAL1P15907 406 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 BNC1Q01954 994 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 EEF1A2Q05639 463 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 TEAD4Q15561 434 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 DEFB133Q30KQ1 61 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 COX20Q5RI15 118 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 INTS11Q5TA45 600 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 PMS2CLQ68D20 193 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 TMEM214Q6NUQ4 689 aaKnown RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 SLC48A1Q6P1K1 146 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 ENPP6Q6UWR7 440 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 FKBP9P1Q75LS8 142 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 KLHL6Q8WZ60 621 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 NEURL3Q96EH8 262 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 PYURFQ96I23 114 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 MAPKAP1Q9BPZ7 522 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 DPH2Q9BQC3 489 aaPredicted RBP13.3□□□□□ -0.28
CLK3-204ENST00000483723 NLNQ9BYT8 704 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 GLIPR2Q9H4G4 154 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 FAM60AQ9NP50 221 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 EPHA6Q9UF33 1036 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 UTS2RQ9UKP6 389 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 FBXW2Q9UKT8 454 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 SPAG17Q6Q759 2223 aa13.3□□□□□ -0.28
CLK3-204ENST00000483723 WASHC1A8K0Z3 465 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 GCM2O75603 506 aaPredicted RBP13.29□□□□□ -0.28
CLK3-204ENST00000483723 SERPINA1P01009 418 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 UQCRBP14927 111 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 CAPZBP47756 277 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 EPHA4P54764 986 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 SHBQ15464 509 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 C18orf63Q68DL7 685 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 FAM180BQ6P0A1 224 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 CBLL1Q75N03 491 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 DGLUCYQ7Z3D6 616 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 SPRED1Q7Z699 444 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 C11orf74Q86VG3 221 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 MAML2Q8IZL2 1156 aaPredicted RBP13.29□□□□□ -0.28
CLK3-204ENST00000483723 SLC25A45Q8N413 288 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 ARHGEF39Q8N4T4 335 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 DNAJC22Q8N4W6 341 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 ZNF655Q8N720 491 aaPredicted RBP13.29□□□□□ -0.28
CLK3-204ENST00000483723 PACRGLQ8N7B6 248 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 C11orf65Q8NCR3 313 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 ICA1LQ8NDH6 482 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 FBXO30Q8TB52 745 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 NCLNQ969V3 563 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 RERGQ96A58 199 aaPredicted RBP13.29□□□□□ -0.28
CLK3-204ENST00000483723 EME1Q96AY2 570 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 C10orf90Q96M02 699 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 ZNF681Q96N22 645 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 AMDHD1Q96NU7 426 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 SLC38A3Q99624 504 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 SLC29A1Q99808 456 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 CHRNA10Q9GZZ6 450 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 YY1AP1Q9H869 796 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 ZNF639Q9UID6 485 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 SNX11Q9Y5W9 270 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 SLC22A7Q9Y694 548 aa13.29□□□□□ -0.28
CLK3-204ENST00000483723 GOLGA4Q13439 2230 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms