RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TSPAN12O95859 305 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 SLC16A8O95907 504 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ENO2P09104 434 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 CLEC2LP0C7M8 214 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ZSCAN5DPP0CG00 497 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ENO3P13929 434 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ETS1P14921 441 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ABOP16442 354 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 OGNP20774 298 aaKnown RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 MGAT1P26572 445 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 RPL22P35268 128 aaKnown RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 THBS2P35442 1172 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 XCR1P46094 333 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 RPS15AP62244 130 aaKnown RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 SARNPP82979 210 aaKnown RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ADORA2A-AS1P86434 159 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 CDK16Q00536 496 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 OC90Q02509 493 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ROM1Q03395 351 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 TAP2Q03519 686 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ACTN3Q08043 901 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 TUBA3CQ13748 450 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 OR1C1Q15619 314 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ACSBG2Q5FVE4 666 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 FCRLBQ6BAA4 426 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 H3F3CQ6NXT2 135 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 TUBA3EQ6PEY2 450 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ETV3LQ6ZN32 361 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 Q6ZPB1 254 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 LANCL3Q6ZV70 420 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 GSTA5Q7RTV2 222 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 PRUNE1Q86TP1 453 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 PLD3Q8IV08 490 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 LYSMD2Q8IV50 215 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 REXO1L1PQ8IX06 675 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 GHDCQ8N2G8 530 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 RNF10Q8N5U6 811 aaKnown RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 CAMKVQ8NCB2 501 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 FBXO15Q8NCQ5 510 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 PPFIBP2Q8ND30 876 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 MDS2Q8NDY4 140 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 OR9A4Q8NGU2 314 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 OR51Q1Q8NH59 317 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 M1APQ8TC57 530 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF480Q8WV37 535 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 C14orf79Q96F83 325 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 KIRREL1Q96J84 757 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 LPAR4Q99677 370 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 BAG1Q99933 345 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 KIFC1Q9BW19 673 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 FAM129AQ9BZQ8 928 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 PCBD2Q9H0N5 130 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 QRSL1Q9H0R6 528 aaKnown RBP5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ANKHQ9HCJ1 492 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 MMP25Q9NPA2 562 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 TMEM184CQ9NVA4 438 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 COQ3Q9NZJ6 369 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 NPIPA1Q9UND3 350 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF835Q9Y2P0 537 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 CRYL1Q9Y2S2 319 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 MEMO1Q9Y316 297 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 CENPEQ02224 2701 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 NF1P21359 2839 aa5.52□□□□□ -1.53
CSDE1-207ENST00000483407 MDC1Q14676 2089 aaKnown RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ANKRD12Q6UB98 2062 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 KCNE1BA0A087WTH5 132 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 CTAGE9A4FU28 777 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 GABRR3A8MPY1 467 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 VSTM5A8MXK1 200 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 GOLGA8KD6RF30 607 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 GOLGA8TH3BQL2 631 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 HRKO00198 91 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 PRRG2O14669 202 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ASNA1O43681 348 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SLC35G6P0C7Q6 338 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 MPC1LP0DKB6 136 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 IL1RNP18510 177 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 IL10P22301 178 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SKP1P63208 163 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 THOC5Q13769 683 aaKnown RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 KCNJ11Q14654 390 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ABRAXAS2Q15018 415 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 NSDHLQ15738 373 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 CCNG2Q16589 344 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 MAPKAPK3Q16644 382 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 CR1LQ2VPA4 569 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ARMC3Q5W041 872 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 KIAA0930Q6ICG6 404 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SPINK14Q6IE38 97 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 SLC25A25Q6KCM7 469 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 NEPROQ6NW34 567 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 CASC4Q6P4E1 433 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 DRICH1Q6PGQ1 229 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 PAPD4Q6PIY7 484 aaKnown RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 CES3Q6UWW8 571 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 GALNTL5Q7Z4T8 443 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ANKRD37Q7Z713 158 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 PCGF5Q86SE9 256 aa5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ATG4DQ86TL0 474 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-207ENST00000483407 ASPGQ86U10 573 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms