RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 BTG2P78543 158 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 MRM1Q6IN84 353 aaKnown RBP16.8■□□□□ 0.28
CPNE1-224ENST00000483359 CLNKQ7Z7G1 428 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 MMP21Q8N119 569 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 KDF1Q8NAX2 398 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-224ENST00000483359 CCT7Q99832 543 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 EFHD1Q9BUP0 239 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 CPNE5Q9HCH3 593 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 PFDN4Q9NQP4 134 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 LANCL2Q9NS86 450 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 LYARQ9NX58 379 aaKnown RBP16.8■□□□□ 0.28
CPNE1-224ENST00000483359 PHF11Q9UIL8 331 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 MCM8Q9UJA3 840 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 ZMIZ1Q9ULJ6 1067 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 DLGAP4Q9Y2H0 992 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 ASB4Q9Y574 426 aa16.8■□□□□ 0.28
CPNE1-224ENST00000483359 A0A1W2PR48 441 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 CYR61O00622 381 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 NKX2-8O15522 239 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 AIFM1O95831 613 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 MAOAP21397 527 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 PRPH2P23942 346 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 EPHA3P29320 983 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 BUD31P41223 144 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-224ENST00000483359 TNFRSF17Q02223 184 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 KIAA0040Q15053 153 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 NOXRED1Q6NXP6 359 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 CCDC81Q6ZN84 652 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 HOMEZQ8IX15 550 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 FNDC5Q8NAU1 212 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 TSLPQ969D9 159 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 UCN3Q969E3 161 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 C11orf24Q96F05 449 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-224ENST00000483359 SLC45A3Q96JT2 553 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 PPP3R2Q96LZ3 170 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 WDR55Q9H6Y2 383 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-224ENST00000483359 AKTIPQ9H8T0 292 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 MEAF6Q9HAF1 191 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 CLK4Q9HAZ1 481 aaKnown RBP16.79■□□□□ 0.28
CPNE1-224ENST00000483359 USH1CQ9Y6N9 552 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 ZZEF1O43149 2961 aa16.79■□□□□ 0.28
CPNE1-224ENST00000483359 WASHC1A8K0Z3 465 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 POLR3GO15318 223 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-224ENST00000483359 MYO1DO94832 1006 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 CD63P08962 238 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 EMP2P54851 167 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 TAS2R50P59544 299 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 SLC13A2Q13183 592 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 NDUFAF5Q5TEU4 345 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 BROXQ5VW32 411 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 MRPS33Q9Y291 106 aaKnown RBP16.78■□□□□ 0.28
CPNE1-224ENST00000483359 MYOCOSA0A1B0GUC4 107 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 CDC14CA4D256 554 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 SLCO1B7G3V0H7 640 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 SDHDO14521 159 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 PROM1O43490 865 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 EDF1O60869 148 aaKnown RBP16.78■□□□□ 0.28
CPNE1-224ENST00000483359 DIAPH2O60879 1101 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 LDB3O75112 727 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 VIMP08670 466 aaKnown RBP16.78■□□□□ 0.28
CPNE1-224ENST00000483359 IL3P08700 152 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 FURINP09958 794 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 NR2F6P10588 404 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 IL10P22301 178 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 TACR1P25103 407 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 ALDH9A1P49189 494 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 ID2Q02363 134 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 SF3A3Q12874 501 aaKnown RBP eCLIP16.78■□□□□ 0.283e-8■■■□□ 16.9
CPNE1-224ENST00000483359 SLC9B1Q4ZJI4 515 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 C6orf136Q5SQH8 315 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 GALNT18Q6P9A2 607 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 LANCL3Q6ZV70 420 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 CLHC1Q8NHS4 586 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 ADAMTS18Q8TE60 1221 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 C8orf44Q96CB5 159 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 PTCHD1Q96NR3 888 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 PRTFDC1Q9NRG1 225 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 FGFR1OP2Q9NVK5 253 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 MS4A12Q9NXJ0 267 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 C5AR2Q9P296 337 aa16.78■□□□□ 0.28
CPNE1-224ENST00000483359 TPRP12270 2363 aaKnown RBP16.78■□□□□ 0.28
CPNE1-224ENST00000483359 A0A087WV48 116 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 TRPC5OSA6NMA1 111 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 NPIPB8E9PQR5 432 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 PRMT3O60678 531 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 RECKO95980 971 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 RHAGQ02094 409 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 ZNF763Q0D2J5 394 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 TUBB8Q3ZCM7 444 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 NXNQ6DKJ4 435 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 OR4N5Q8IXE1 308 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 TM4SF18Q96CE8 201 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 TSSK3Q96PN8 268 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 RPF2Q9H7B2 306 aaKnown RBP16.77■□□□□ 0.28
CPNE1-224ENST00000483359 NPHS2Q9NP85 383 aa16.77■□□□□ 0.28
CPNE1-224ENST00000483359 ZNF195O14628 629 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 C8orf89P0DMQ9 161 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 SDC1P18827 310 aa16.77■□□□□ 0.27
CPNE1-224ENST00000483359 TLX1P31314 330 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms