RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TEX264Q9Y6I9 313 aa12.89□□□□□ -0.35
VARS-226ENST00000483275 A0A0G2JNJ9 132 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 RTCAO00442 366 aaKnown RBP12.88□□□□□ -0.35
VARS-226ENST00000483275 CLDN4O14493 209 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 CDK2AP1O14519 115 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 CLGNO14967 610 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 GLSO94925 669 aaPredicted RBP12.88□□□□□ -0.35
VARS-226ENST00000483275 GLI4P10075 376 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 CD22P20273 847 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 ACVR2AP27037 513 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 DNAJA1P31689 397 aaKnown RBP12.88□□□□□ -0.35
VARS-226ENST00000483275 ADH7P40394 386 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 HSPA7P48741 367 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 DLX5P56178 289 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 ELAVL1Q15717 326 aaKnown RBP12.88□□□□□ -0.35
VARS-226ENST00000483275 TRIM40Q6P9F5 258 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 HSDL2Q6YN16 418 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 ZNF793Q6ZN11 406 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 KLHL7Q8IXQ5 586 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 OR2L5Q8NG80 312 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 EXT2Q93063 718 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 RUNDC3BQ96NL0 473 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 TRIM31Q9BZY9 425 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 LIME1Q9H400 295 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 PRM3Q9NNZ6 103 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 TUBA8Q9NY65 449 aaPredicted RBP12.88□□□□□ -0.35
VARS-226ENST00000483275 WWOXQ9NZC7 414 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 Q9UFV3 132 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 CLCA3PQ9Y6N3 262 aa12.88□□□□□ -0.35
VARS-226ENST00000483275 VPS13CQ709C8 3753 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 C17orf105B2RV13 164 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 SAP18O00422 153 aaKnown RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 TAPBPO15533 448 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 H2AFYO75367 372 aaKnown RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 ZWINTO95229 277 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 ETHE1O95571 254 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 HOXD4P09016 255 aaPredicted RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 PIGAP37287 484 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 IST1P53990 364 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 CDKL1Q00532 357 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 STX4Q12846 297 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 ABHD17CQ6PCB6 329 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 RTL4Q6ZR62 310 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 GK5Q6ZS86 529 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 FAM47EQ6ZV65 393 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 TRILQ7L0X0 811 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 UBE3DQ7Z6J8 389 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 ADAMTSL2Q86TH1 951 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 SLC22A16Q86VW1 577 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 OR4N5Q8IXE1 308 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 ZNF595Q8IYB9 648 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 ZZZ3Q8IYH5 903 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 TMEM132CQ8N3T6 1108 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 NKAPQ8N5F7 415 aaKnown RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 SLC2A12Q8TD20 617 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 MAPKAP1Q9BPZ7 522 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 SORBS1Q9BX66 1292 aaKnown RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 NPLQ9BXD5 320 aaPredicted RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 ALOXE3Q9BYJ1 711 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 KCNF1Q9H3M0 494 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 SMYD2Q9NRG4 433 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 SPRR3Q9UBC9 169 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 ZNF490Q9ULM2 529 aaPredicted RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 SNX12Q9UMY4 172 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 DAPP1Q9UN19 280 aa12.87□□□□□ -0.35
VARS-226ENST00000483275 MRPS33Q9Y291 106 aaKnown RBP12.87□□□□□ -0.35
VARS-226ENST00000483275 ANKDD1BA6NHY2 528 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 FOXO6A8MYZ6 492 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 HRKO00198 91 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 PHGDHO43175 533 aaKnown RBP12.86□□□□□ -0.35
VARS-226ENST00000483275 KLK8O60259 260 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 PRKRAO75569 313 aaKnown RBP12.86□□□□□ -0.35
VARS-226ENST00000483275 CLEC3AO75596 197 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 CD1EP15812 388 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 TNNI3P19429 210 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 ENDOUP21128 410 aaKnown RBP12.86□□□□□ -0.35
VARS-226ENST00000483275 HNMTP50135 292 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 MTTPP55157 894 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 WNT3P56703 355 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 RNF4P78317 190 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 MRPS25P82663 173 aaKnown RBP12.86□□□□□ -0.35
VARS-226ENST00000483275 MGAT5Q09328 741 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 FOXO1Q12778 655 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 DOC2AQ14183 400 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 TGFBIQ15582 683 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 OR4D1Q15615 310 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 ADPRMQ3LIE5 342 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 PRAMEF20Q5VT98 475 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 B3GNT6Q6ZMB0 384 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 DGAT2L6Q6ZPD8 337 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 ACAD11Q709F0 780 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 WDR53Q7Z5U6 358 aaPredicted RBP12.86□□□□□ -0.35
VARS-226ENST00000483275 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 FAM109AQ8N4B1 249 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 RNF175Q8N4F7 328 aa12.86□□□□□ -0.35
VARS-226ENST00000483275 FBXO36Q8NEA4 188 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms