RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PTRH2Q9Y3E5 179 aaKnown RBP18.8■□□□□ 0.6
TRAPPC12-220ENST00000482645 A0A0A6YYD5 115 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 GNG14A0A1W2PPG7 69 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 FAM227AF5H4B4 570 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 UBDO15205 165 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 TMPRSS11DO60235 418 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 PCDH7O60245 1069 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 SCELO95171 688 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ONECUT2O95948 504 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ALBP02768 609 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ZGLP1P0C6A0 271 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 RNH1P13489 461 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 TPP2P29144 1249 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 EIF2S3P41091 472 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ARFIP1P53367 373 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 MAPK12P53778 367 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 OGFOD2Q6N063 350 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ZC3H7AQ8IWR0 971 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 CSF3RQ99062 836 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 NPLQ9BXD5 320 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 KCND3Q9UK17 655 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 DAPP1Q9UN19 280 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 NPIPB8E9PQR5 432 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 B4GALT2O60909 372 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 BMP10O95393 424 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 RAB40ALP0C0E4 278 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 FAM58BPP0C7Q3 252 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 PTPN4P29074 926 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 FOXK2Q01167 660 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 KLC1Q07866 573 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 MAD2L1Q13257 205 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 MTDHQ86UE4 582 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 PROSER1Q86XN7 944 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ZCCHC7Q8N3Z6 543 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 CDC26Q8NHZ8 85 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 TBC1D20Q96BZ9 403 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 GPR87Q9BY21 358 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 DPH1Q9BZG8 443 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 NMUR2Q9GZQ4 415 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 SLC26A1Q9H2B4 701 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 NOP53Q9NZM5 478 aaKnown RBP18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 ADAM29Q9UKF5 820 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 TCFL5Q9UL49 500 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 SPACA6W5XKT8 324 aa18.79■□□□□ 0.6
TRAPPC12-220ENST00000482645 URB1O60287 2271 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 CFAP47Q6ZTR5 3102 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 OR2W5A6NFC9 320 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 TERTO14746 1132 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 DCTN3O75935 186 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 MYO1DO94832 1006 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 FHP07954 510 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 CPN2P22792 545 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 TIA1P31483 386 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 FOLR3P41439 243 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 DIO3P55073 304 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 HNRNPH2P55795 449 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 RAB38P57729 211 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 RAE1P78406 368 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 EMX2Q04743 252 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 UBAP2LQ14157 1087 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 IL23RQ5VWK5 629 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 LRRC69Q6ZNQ3 347 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 RIPOR1Q6ZS17 1223 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 SPATA19Q7Z5L4 167 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 GPR180Q86V85 440 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 LAPTM4BQ86VI4 370 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 SPACA3Q8IXA5 215 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 SPSB2Q99619 263 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 CRB3Q9BUF7 120 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 WDR54Q9H977 334 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 LYRM4Q9HD34 91 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 C14orf105Q9NVL8 296 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 LYARQ9NX58 379 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 NXT1Q9UKK6 140 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 MKL2Q9ULH7 1088 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 EIF3LQ9Y262 564 aaKnown RBP18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 TMED5Q9Y3A6 229 aa18.78■□□□□ 0.6
TRAPPC12-220ENST00000482645 IGLV3-12A0A075B6K2 115 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 FCHO1O14526 889 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 PRKRAO75569 313 aaKnown RBP18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 KLF7O75840 302 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 ANXA4P09525 319 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 MAPK1P28482 360 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 KIAA0040Q15053 153 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 METTL21CQ5VZV1 264 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 LIX1Q8N485 282 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 STARD8Q92502 1023 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 CCNL2Q96S94 520 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 EFHD1Q9BUP0 239 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 CLK4Q9HAZ1 481 aaKnown RBP18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 AIG1Q9NVV5 245 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 KCMF1Q9P0J7 381 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 PHF11Q9UIL8 331 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 MCM8Q9UJA3 840 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 DLGAP4Q9Y2H0 992 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 ATG4BQ9Y4P1 393 aa18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 COPG1Q9Y678 874 aaKnown RBP18.77■□□□□ 0.6
TRAPPC12-220ENST00000482645 VSTM2BA6NLU5 285 aa18.76■□□□□ 0.59
TRAPPC12-220ENST00000482645 TAF4O00268 1085 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms