RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 VMP1Q96GC9 406 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 CCDC120Q96HB5 630 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 GPR137Q96N19 417 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 PAFAH2Q99487 392 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 FMO2Q99518 471 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 OR8D2Q9GZM6 311 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ACTR8Q9H981 624 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 DMRT3Q9NQL9 472 aa9.76□□□□□ -0.85
CPSF4-212ENST00000482251 ARHGAP10A1A4S6 786 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 ASPDHA6ND91 283 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 PRSS44E7EML9 344 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 POC1B-GALNT4F8VUJ3 575 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 G3V3Y1 287 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 WWP2O00308 870 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 OR2J2O76002 312 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 KLHL2O95198 593 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 HIST1H1TP22492 207 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-212ENST00000482251 CPN2P22792 545 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 ECHS1P30084 290 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 PTGER1P34995 402 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 CA7P43166 264 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 MEOX1P50221 254 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 HLCSP50747 726 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 RPS13P62277 151 aaKnown RBP9.75□□□□□ -0.85
CPSF4-212ENST00000482251 RBPJQ06330 500 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 TERF2Q15554 542 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 ELAVL1Q15717 326 aaKnown RBP9.75□□□□□ -0.85
CPSF4-212ENST00000482251 CPSF6Q16630 551 aaKnown RBP eCLIP9.75□□□□□ -0.85
CPSF4-212ENST00000482251 AP5B1Q2VPB7 878 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 TECRLQ5HYJ1 363 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 RNFT1Q5M7Z0 435 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 KHDRBS2Q5VWX1 349 aaKnown RBP9.75□□□□□ -0.85
CPSF4-212ENST00000482251 C3P1Q6ZMU1 363 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 MMGT1Q8N4V1 131 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 PTGR2Q8N8N7 351 aaPredicted RBP9.75□□□□□ -0.85
CPSF4-212ENST00000482251 RHEBL1Q8TAI7 183 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 UBE2E3Q969T4 207 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 PHF21BQ96EK2 531 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 CMTM7Q96FZ5 175 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 SCYL1Q96KG9 808 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 GPR78Q96P69 363 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 CDK15Q96Q40 435 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 CCDC77Q9BR77 488 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 TBCDQ9BTW9 1192 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 ALOXE3Q9BYJ1 711 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 LYRM4Q9HD34 91 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 KCMF1Q9P0J7 381 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 XPR1Q9UBH6 696 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 SUCOQ9UBS9 1254 aaKnown RBP9.75□□□□□ -0.85
CPSF4-212ENST00000482251 PCDHGB6Q9Y5F9 930 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 CLCA3PQ9Y6N3 262 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 UNC79Q9P2D8 2635 aa9.75□□□□□ -0.85
CPSF4-212ENST00000482251 C17orf105B2RV13 164 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 PLPP1O14494 284 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 TFECO14948 347 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 FGF17O60258 216 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 CDC40O60508 579 aaKnown RBP eCLIP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 CTNSO60931 367 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ETHE1O95571 254 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 CTAGE8P0CG41 777 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ABOP16442 354 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 TNNI3P19429 210 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 TRHRP34981 398 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 CASP2P42575 452 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SSR4P51571 173 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 NEK2P51955 445 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ALDH18A1P54886 795 aaKnown RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 CASP6P55212 293 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 HNRNPH2P55795 449 aaKnown RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SLAMF1Q13291 335 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 GTF2H2Q13888 395 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 E2F2Q14209 437 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 RCN2Q14257 317 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ACAP2Q15057 778 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 TMEM35AQ53FP2 167 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 C18orf63Q68DL7 685 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 GTF2H2CQ6P1K8 395 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 CHSY3Q70JA7 882 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 RPS27LQ71UM5 84 aaKnown RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 MDGA2Q7Z553 956 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SIAH3Q8IW03 269 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SULF2Q8IWU5 870 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 CTAGE4Q8IX94 777 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SRFBP1Q8NEF9 429 aaKnown RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SLC2A12Q8TD20 617 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 PTPMT1Q8WUK0 201 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SLC44A1Q8WWI5 657 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ITLN2Q8WWU7 325 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ASB15Q8WXK1 588 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 RELTQ969Z4 430 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 NSUN5Q96P11 429 aaKnown RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ROGDIQ9GZN7 287 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 IPPKQ9H8X2 491 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 ERVK-11Q9UQG0 969 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 KLF13Q9Y2Y9 288 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-212ENST00000482251 RNF11Q9Y3C5 154 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 IKBKGQ9Y6K9 419 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 SPACA6W5XKT8 324 aa9.74□□□□□ -0.85
CPSF4-212ENST00000482251 MYO7BQ6PIF6 2116 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms