RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 DPEP3Q9H4B8 488 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 KCNMB3Q9NPA1 279 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 EXOC7Q9UPT5 735 aa4.7□□□□□ -1.66
SF3B1-210ENST00000482158 ABCC9O60706 1549 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 INPP4BO15327 924 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 SORBS2O94875 1100 aaKnown RBP4.69□□□□□ -1.66
SF3B1-210ENST00000482158 GAS8O95995 478 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 MMP10P09238 476 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 P4HA1P13674 534 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 EZRP15311 586 aaKnown RBP4.69□□□□□ -1.66
SF3B1-210ENST00000482158 UGT1A6P19224 532 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 HLA-DPA1P20036 260 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 GPX3P22352 226 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 RIGQ13278 110 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 KNOP1Q1ED39 458 aaKnown RBP4.69□□□□□ -1.66
SF3B1-210ENST00000482158 FAAP20Q6NZ36 180 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 ALKBH5Q6P6C2 394 aaKnown RBP4.69□□□□□ -1.66
SF3B1-210ENST00000482158 DOK6Q6PKX4 331 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 CARM1Q86X55 608 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 CCDC197Q8NCU1 140 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 GANCQ8TET4 914 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 ZNF689Q96CS4 500 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-210ENST00000482158 CFAP36Q96G28 342 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 PCED1BQ96HM7 432 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 AGAP3Q96P47 875 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 AGPAT1Q99943 283 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 CABLES2Q9BTV7 478 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 CXXC4Q9H2H0 198 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 PRMT8Q9NR22 394 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-210ENST00000482158 ZCCHC3Q9NUD5 404 aaKnown RBP4.69□□□□□ -1.66
SF3B1-210ENST00000482158 MED17Q9NVC6 651 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 KNSTRNQ9Y448 316 aa4.69□□□□□ -1.66
SF3B1-210ENST00000482158 IGHV3OR16-10A0A075B7F0 116 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 TRBV5-4A0A0C4DH59 114 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 IQCMA0A1B0GVH7 501 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 SH3PXD2BA1X283 911 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 TLR4O00206 839 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 SLC28A1O00337 649 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 TRAFD1O14545 582 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-210ENST00000482158 CCSO14618 274 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 CSDE1O75534 798 aaKnown RBP4.68□□□□□ -1.66
SF3B1-210ENST00000482158 THEGLP0DJG4 465 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 PKLRP30613 574 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 CRYBA2P53672 197 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 ARF5P84085 180 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 CBX3Q13185 183 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 GCKRQ14397 625 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 HEPACAMQ14CZ8 416 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 ZNF146Q15072 292 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 OR1C1Q15619 314 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 WSCD2Q2TBF2 565 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 RFTN2Q52LD8 501 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-210ENST00000482158 KCNMB4Q86W47 210 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 RTL3Q8N8U3 475 aaKnown RBP4.68□□□□□ -1.66
SF3B1-210ENST00000482158 OR4L1Q8NH43 312 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 OR4A16Q8NH70 328 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 PSMA8Q8TAA3 256 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 MIPOL1Q8TD10 442 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 LRRC15Q8TF66 581 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 ATP6V0A1Q93050 837 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 MRPL53Q96EL3 112 aaKnown RBP4.68□□□□□ -1.66
SF3B1-210ENST00000482158 SPATA13Q96N96 652 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 GAL3ST4Q96RP7 486 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 VGLL1Q99990 258 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 PLEKHA3Q9HB20 300 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 DDX28Q9NUL7 540 aaKnown RBP4.68□□□□□ -1.66
SF3B1-210ENST00000482158 TECRQ9NZ01 308 aaKnown RBP4.68□□□□□ -1.66
SF3B1-210ENST00000482158 PRSS21Q9Y6M0 314 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 FGD5Q6ZNL6 1462 aa4.68□□□□□ -1.66
SF3B1-210ENST00000482158 IGKV3D-15A0A087WSY6 115 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 OR5H15A6NDH6 313 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 ARHGEF33A8MVX0 844 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 K7EQG2 157 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 NTN3O00634 580 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-210ENST00000482158 ZNF749O43361 778 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 TXNDC12O95881 172 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 CGAP01215 116 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 TRIM49P0CI25 452 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 TRIM49CP0CI26 452 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 CT45A8P0DMV1 189 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 CT45A9P0DMV2 189 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 FCGR2BP31994 310 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-210ENST00000482158 FCGR2CP31995 323 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 VEGFCP49767 419 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 FKBP3Q00688 224 aaKnown RBP4.67□□□□□ -1.66
SF3B1-210ENST00000482158 RBBP4Q09028 425 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 ELAVL2Q12926 359 aaKnown RBP4.67□□□□□ -1.66
SF3B1-210ENST00000482158 CT45A2Q5DJT8 189 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 B3GLCTQ6Y288 498 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 C17orf64Q86WR6 236 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 FAM131BQ86XD5 332 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 ZNF440Q8IYI8 595 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 GLYATL1Q969I3 302 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 NABP1Q96AH0 204 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 DTD2Q96FN9 168 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 ALKBH3Q96Q83 286 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-210ENST00000482158 LRRC61Q9BV99 259 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 WWP1Q9H0M0 922 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 DBNDD1Q9H9R9 158 aa4.67□□□□□ -1.66
SF3B1-210ENST00000482158 KCNK13Q9HB14 408 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms