RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	PRAMEF2	O60811	474 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	CTNS	O60931	367 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	EED	O75530	441 aa	Known RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	WISP2	O76076	250 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	GBA	P04062	536 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	IFNA16	P05015	189 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	RNF224	P0DH78	156 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	CPN2	P22792	545 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	TPP2	P29144	1249 aa	Predicted RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	SERPINB1	P30740	379 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	HNRNPH2	P55795	449 aa	Known RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	TAS2R50	P59544	299 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	TRAF3	Q13114	568 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF766	Q5HY98	468 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	RPUSD3	Q6P087	351 aa	Known RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	FAM180A	Q6UWF9	173 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	RPS19BP1	Q86WX3	136 aa	Known RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	OR4N5	Q8IXE1	308 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	SLC5A8	Q8N695	610 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	APCDD1L	Q8NCL9	501 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	B3GNT7	Q8NFL0	401 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	OR4F6	Q8NGB9	312 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	SUN3	Q8TAQ9	357 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	ADAMTS18	Q8TE60	1221 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	MZB1	Q8WU39	189 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	UCN3	Q969E3	161 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	NCLN	Q969V3	563 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	MTBP	Q96DY7	904 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	UTP23	Q9BRU9	249 aa	Known RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	ALOXE3	Q9BYJ1	711 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	ROGDI	Q9GZN7	287 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	LIN28A	Q9H9Z2	209 aa	Known RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	LYRM4	Q9HD34	91 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	KLHL1	Q9NR64	748 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	ADGRE2	Q9UHX3	823 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	TMCO1	Q9UM00	188 aa		12.02	□□□□□ -0.49
ABCF3-215	ENST00000481116	IQANK1	A0A1B0GTG1	560 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	BLACE	A4D250	179 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	DLX3	O60479	287 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	UGDH	O60701	494 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	AGFG2	O95081	481 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	SCEL	O95171	688 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	RPS17	P08708	135 aa	Known RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	PYGB	P11216	843 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	PTX3	P26022	381 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	BSG	P35613	385 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	SLCO1A2	P46721	670 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	GPR143	P51810	404 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	MLF1	P58340	268 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	OC90	Q02509	493 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	STX4	Q12846	297 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ELOA	Q14241	798 aa	Known RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	OR1C1	Q15619	314 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	SGO1	Q5FBB7	561 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	C18orf63	Q68DL7	685 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	TTC19	Q6DKK2	380 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	METTL2B	Q6P1Q9	378 aa	Known RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	MILR1	Q7Z6M3	343 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF321P	Q8N8H1	164 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ST6GALNAC3	Q8NDV1	305 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	MDS2	Q8NDY4	140 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	DOK4	Q8TEW6	326 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF483	Q8TF39	744 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	REPS1	Q96D71	796 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	NTMT1	Q9BV86	223 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF717	Q9BY31	904 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	DEFB126	Q9BYW3	111 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ANKZF1	Q9H8Y5	726 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ADAP2	Q9NPF8	381 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	FARSB	Q9NSD9	589 aa	Known RBP	12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	OLAH	Q9NV23	265 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ABI3	Q9P2A4	366 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	TSC22D4	Q9Y3Q8	395 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ATG4B	Q9Y4P1	393 aa		12.01	□□□□□ -0.49
ABCF3-215	ENST00000481116	ARHGAP10	A1A4S6	786 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	SMIM23	A6NLE4	172 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	CYSRT1	A8MQ03	144 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	TMPRSS11D	O60235	418 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	FGF17	O60258	216 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	RASAL1	O95294	804 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	MST1	P26927	711 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	CLCN2	P51788	898 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	PHEX	P78562	749 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	RCN2	Q14257	317 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	UNC50	Q53HI1	259 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF324B	Q6AW86	544 aa	Predicted RBP	12	□□□□□ -0.49
ABCF3-215	ENST00000481116	LETMD1	Q6P1Q0	360 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	DGAT2L6	Q6ZPD8	337 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	GPR180	Q86V85	440 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF227	Q86WZ6	799 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	BCORP1	Q8N888	145 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	TRPC4AP	Q8TEL6	797 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12	□□□□□ -0.49
ABCF3-215	ENST00000481116	VMP1	Q96GC9	406 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	TMEM237	Q96Q45	408 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	SLX1A	Q9BQ83	275 aa		12	□□□□□ -0.49

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