RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 A1L4Q6 167 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 OR2W5A6NFC9 320 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 A8MVJ9 347 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 STX16-NPEPL1H3BU86 382 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 UBXN8O00124 270 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 FOXE1O00358 373 aaPredicted RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 STX16O14662 325 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 PRRG2O14669 202 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 TFECO14948 347 aaPredicted RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 KLK8O60259 260 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ITGA10O75578 1167 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 PIAS1O75925 651 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 SEMA3DO95025 777 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 C2P06681 752 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ABOP16442 354 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 TNNI3P19429 210 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 CPN2P22792 545 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ATP5A1P25705 553 aaKnown RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 SNRPNP63162 240 aaKnown RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 CUL3Q13618 768 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 PFKFB4Q16877 469 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 DEPDC1Q5TB30 811 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 FCRLBQ6BAA4 426 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 OR4C11Q6IEV9 310 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 OPN5Q6U736 354 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 Q6ZPB1 254 aaPredicted RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 PAGE2Q7Z2X7 111 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 NUDT13Q86X67 352 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 MYLK4Q86YV6 388 aaPredicted RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 CENPLQ8N0S6 344 aaPredicted RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 CEP112Q8N8E3 955 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ACOT4Q8N9L9 421 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 FAM47BQ8NA70 645 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 GOLM1Q8NBJ4 401 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 SLC44A1Q8WWI5 657 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ASB15Q8WXK1 588 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 NCLNQ969V3 563 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ISL2Q96A47 359 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 MTBPQ96DY7 904 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 LRRC1Q9BTT6 524 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 UNKQ9C0B0 810 aaKnown RBP10.68□□□□□ -0.7
CCM2-213ENST00000480658 PRDM7Q9NQW5 492 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 KLHL1Q9NR64 748 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 NMRK1Q9NWW6 199 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 HPF1Q9NWY4 346 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ANKRD10Q9NXR5 420 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 AHSPQ9NZD4 102 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 MYOTQ9UBF9 498 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 STK38LQ9Y2H1 464 aa10.68□□□□□ -0.7
CCM2-213ENST00000480658 ESYT3A0FGR9 886 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 FAM227AF5H4B4 570 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 CCL21O00585 134 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 GUCY1B2O75343 617 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 CLDN9O95484 217 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 CLDN1O95832 211 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 PTGER4P35408 488 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 ARL1P40616 181 aaPredicted RBP10.67□□□□□ -0.7
CCM2-213ENST00000480658 KCNK10P57789 538 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 TNFRSF17Q02223 184 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 GTF2H2Q13888 395 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 RUNX2Q13950 521 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 C18orf21Q32NC0 220 aaPredicted RBP10.67□□□□□ -0.7
CCM2-213ENST00000480658 NDUFAF5Q5TEU4 345 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 C6orf163Q5TEZ5 329 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 C1QL3Q5VWW1 255 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 GTF2H2CQ6P1K8 395 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 CYP20A1Q6UW02 462 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 GK5Q6ZS86 529 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 VN1R5Q7Z5H4 357 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 GPR180Q86V85 440 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 SPPL2CQ8IUH8 684 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 KIF2BQ8N4N8 673 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 SLC15A4Q8N697 577 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 TEX9Q8N6V9 391 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 HUS1BQ8NHY5 278 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 KIF18AQ8NI77 898 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 NUBPLQ8TB37 319 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 SLC22A8Q8TCC7 542 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 PHF10Q8WUB8 498 aaKnown RBP10.67□□□□□ -0.7
CCM2-213ENST00000480658 ATP6V1E2Q96A05 226 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 NXNL1Q96CM4 212 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 DGAT2Q96PD7 388 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 F2RL3Q96RI0 385 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 SERPINI1Q99574 410 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 NPAS2Q99743 824 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 ALOXE3Q9BYJ1 711 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 RPF2Q9H7B2 306 aaKnown RBP10.67□□□□□ -0.7
CCM2-213ENST00000480658 IPPKQ9H8X2 491 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 DMRT3Q9NQL9 472 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 ZNF835Q9Y2P0 537 aa10.67□□□□□ -0.7
CCM2-213ENST00000480658 ARHGAP10A1A4S6 786 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 OR6C76A6NM76 312 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 CAPN14A8MX76 684 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 C17orf105B2RV13 164 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 C4orf51C9J302 202 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ASNA1O43681 348 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 ZG16O60844 167 aa10.66□□□□□ -0.7
CCM2-213ENST00000480658 FAM155BO75949 473 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms