RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 C2orf74A8MZ97 194 aa9.21□□□□□ -0.94
VEGFA-212ENST00000480614 PREPP48147 710 aa9.21□□□□□ -0.94
VEGFA-212ENST00000480614 GALNT2Q10471 571 aa9.21□□□□□ -0.94
VEGFA-212ENST00000480614 NCCRP1Q6ZVX7 275 aaPredicted RBP9.21□□□□□ -0.94
VEGFA-212ENST00000480614 CENPSQ8N2Z9 138 aa9.21□□□□□ -0.94
VEGFA-212ENST00000480614 PFDN5Q99471 154 aa9.21□□□□□ -0.94
VEGFA-212ENST00000480614 VRK1Q99986 396 aaPredicted RBP9.21□□□□□ -0.94
VEGFA-212ENST00000480614 GSKIPQ9P0R6 139 aa9.21□□□□□ -0.94
VEGFA-212ENST00000480614 SF3B4Q15427 424 aaKnown RBP eCLIP9.2□□□□□ -0.942e-10■■■□□ 18
VEGFA-212ENST00000480614 COL28A1Q2UY09 1125 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 FOXRED2Q8IWF2 684 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 DCAF4L2Q8NA75 395 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 OR5L2Q8NGL0 311 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 THEM6Q8WUY1 208 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 RAB7BQ96AH8 199 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 OR2M4Q96R27 311 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 KLHL13Q9P2N7 655 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CACNA1HO95180 2353 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 A8MUA0 341 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 IFI30P13284 250 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 AAK1Q2M2I8 961 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TIFABQ6ZNK6 161 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TMPPEQ6ZT21 453 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TRIB2Q92519 343 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 LRIG1Q96JA1 1093 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 OR5B12Q96R08 314 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF382Q96SR6 550 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 FBRSQ9HAH7 460 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 FAM86C1Q9NVL1 165 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 UCKL1Q9NWZ5 548 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 SLC22A14Q9Y267 594 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 NACAE9PAV3 2078 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CPED1A4D0V7 1026 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CD48P09326 243 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 PMS2P3Q13401 168 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 MADCAM1Q13477 382 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 C1orf52Q8N6N3 182 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CMASQ8NFW8 434 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 OR4K14Q8NGD5 310 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CCDC120Q96HB5 630 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 KCNH6Q9H252 994 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TAS2R8Q9NYW2 309 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TCRBV7S2A1N4TA0A589 114 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 BTBD19C9JJ37 291 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 I3L521 148 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 IRF2P14316 349 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 GNRHRP30968 328 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 DUX1O43812 170 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CD83Q01151 205 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CHRNA6Q15825 494 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ARL14Q8N4G2 192 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 HAVCR2Q8TDQ0 301 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TM9SF4Q92544 642 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TFGQ92734 400 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 KCNIP1Q9NZI2 227 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ZFR2Q9UPR6 939 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 LOC100509620A0A075B734 347 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 BDH1Q02338 343 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 METTL25Q8N6Q8 603 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CYB5D2Q8WUJ1 264 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ZUFSPQ96AP4 578 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 WDR45Q9Y484 360 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CCRL2O00421 344 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 POP7O75817 140 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 GABARAPL2P60520 117 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 KLF1Q13351 362 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ATG9BQ674R7 924 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TPRG1Q6ZUI0 275 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ENDOVQ8N8Q3 282 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 MFSD8Q8NHS3 518 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 PHOSPHO1Q8TCT1 267 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CHPT1Q8WUD6 406 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 OR2B2Q9GZK3 357 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 HHLA1C9JL84 531 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF821O75541 412 aaPredicted RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 PIGRP01833 764 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 RPL17P18621 184 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ACTBP60709 375 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ACTG1P63261 375 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 GRIK2Q13002 908 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF181Q2M3W8 571 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 POLDIP3Q9BY77 421 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ADAMTS10Q9H324 1103 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 TPT1P8Q9HAU6 139 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.2□□□□□ -0.942e-8■■■□□ 14.7
VEGFA-212ENST00000480614 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 LRRTM2O43300 516 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 MMP20O60882 483 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 RAC2P15153 192 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 RPS24P62847 133 aaKnown RBP9.2□□□□□ -0.94
VEGFA-212ENST00000480614 PITRM1Q5JRX3 1037 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 SLC27A4Q6P1M0 643 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 SAMD11Q96NU1 681 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 ARHGAP9Q9BRR9 750 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 OSBPL7Q9BZF2 842 aa9.2□□□□□ -0.94
VEGFA-212ENST00000480614 MVB12BQ9H7P6 319 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms