RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CSF3RQ99062 836 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 TUBB1Q9H4B7 451 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 MANSC1Q9H8J5 431 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 MED4Q9NPJ6 270 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 THAP1Q9NVV9 213 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 P4HTMQ9NXG6 502 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 C19orf25Q9UFG5 118 aaPredicted RBP18.57■□□□□ 0.56
LIME1-205ENST00000480139 MCM8Q9UJA3 840 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 FIS1Q9Y3D6 152 aa18.57■□□□□ 0.56
LIME1-205ENST00000480139 IGKV3D-11A0A0A0MRZ8 115 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 FAM227AF5H4B4 570 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 PROM1O43490 865 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 RGS14O43566 566 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 B4GALT2O60909 372 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 KLK1P06870 262 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 ACPPP15309 386 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 NR1D1P20393 614 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 CPN2P22792 545 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 BUD31P41223 144 aaPredicted RBP18.56■□□□□ 0.56
LIME1-205ENST00000480139 RRADP55042 308 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 HNRNPH2P55795 449 aaKnown RBP18.56■□□□□ 0.56
LIME1-205ENST00000480139 TRA2BP62995 288 aaKnown RBP18.56■□□□□ 0.56
LIME1-205ENST00000480139 ACSM2AQ08AH3 577 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 DEFB109BQ30KR1 87 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 HSP90B2PQ58FF3 399 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 CCNYL2Q5T2Q4 361 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 ACSM2BQ68CK6 577 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 BORAQ6PGQ7 559 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 ZNF781Q8N8C0 355 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 FAM47BQ8NA70 645 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 C7orf57Q8NEG2 295 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 OR11G2Q8NGC1 345 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 FAM76AQ8TAV0 307 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 AGR3Q8TD06 166 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 FER1L6-AS2Q96M78 137 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 ZNF395Q9H8N7 513 aaPredicted RBP18.56■□□□□ 0.56
LIME1-205ENST00000480139 PFDN4Q9NQP4 134 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 FBXW2Q9UKT8 454 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 KCNMB2Q9Y691 235 aa18.56■□□□□ 0.56
LIME1-205ENST00000480139 TCRBV16S1A1N1A0A5B0 115 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 DYNC1I1O14576 645 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 CTNSO60931 367 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 GUCY1B2O75343 617 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 GBAP04062 536 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 TLX1P31314 330 aaPredicted RBP18.55■□□□□ 0.56
LIME1-205ENST00000480139 GSTM5P46439 218 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 RPL14P50914 215 aaKnown RBP18.55■□□□□ 0.56
LIME1-205ENST00000480139 HNRNPFP52597 415 aaKnown RBP18.55■□□□□ 0.56
LIME1-205ENST00000480139 MAPK12P53778 367 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 NSDHLQ15738 373 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 XKR7Q5GH72 579 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 Q6ZSR9 355 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 ANKRD37Q7Z713 158 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 EFCAB3Q8N7B9 438 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 TMEM52Q8NDY8 209 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 APOBEC4Q8WW27 367 aaKnown RBP18.55■□□□□ 0.56
LIME1-205ENST00000480139 APIPQ96GX9 242 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 PTCHD1Q96NR3 888 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 ZNF700Q9H0M5 742 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 PRTFDC1Q9NRG1 225 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 ATG4BQ9Y4P1 393 aa18.55■□□□□ 0.56
LIME1-205ENST00000480139 SCN2AQ99250 2005 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 LOC400499M0QZD8 3231 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 IGHV1-45A0A0A0MS14 117 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 OR2W5A6NFC9 320 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 PIP5K1BO14986 540 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 PCDH7O60245 1069 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 HPP00738 406 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 NR2F6P10588 404 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 COX6A1P12074 109 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 PPP2R1BP30154 601 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 TIA1P31483 386 aaKnown RBP eCLIP18.54■□□□□ 0.56
LIME1-205ENST00000480139 RAE1P78406 368 aaKnown RBP18.54■□□□□ 0.56
LIME1-205ENST00000480139 BTG2P78543 158 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 OCRLQ01968 901 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 TBR1Q16650 682 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 SPDYAQ5MJ70 313 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 DCAF10Q5QP82 559 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 CPEB2Q7Z5Q1 589 aaKnown RBP18.54■□□□□ 0.56
LIME1-205ENST00000480139 DDIASQ8IXT1 998 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 OR2T11Q8NH01 316 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 ZNF75CPQ92670 426 aaPredicted RBP18.54■□□□□ 0.56
LIME1-205ENST00000480139 TANKQ92844 425 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 RPF2Q9H7B2 306 aaKnown RBP18.54■□□□□ 0.56
LIME1-205ENST00000480139 INTS9Q9NV88 658 aaKnown RBP18.54■□□□□ 0.56
LIME1-205ENST00000480139 C1orf109Q9NX04 203 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 FBXL4Q9UKA2 621 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 CLDN16Q9Y5I7 305 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 PTGDR2Q9Y5Y4 395 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 MGAQ8IWI9 3026 aa18.54■□□□□ 0.56
LIME1-205ENST00000480139 A0A1W2PR48 441 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 LSM1O15116 133 aaKnown RBP18.53■□□□□ 0.56
LIME1-205ENST00000480139 LINC00032P0C843 101 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 MAOAP21397 527 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 SLC13A2Q13183 592 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 BIKQ13323 160 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 KIAA0040Q15053 153 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 FAAH2Q6GMR7 532 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 LANCL3Q6ZV70 420 aa18.53■□□□□ 0.56
LIME1-205ENST00000480139 NDUFAF7Q7L592 441 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms