RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 IFI6P09912 130 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF888P0CJ79 500 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF26P17031 533 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 NTSP30990 170 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 KDELR2P33947 212 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 CHI3L1P36222 383 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 LSSP48449 732 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ALDH9A1P49189 494 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 CSNK1EP49674 416 aaKnown RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 CCT8P50990 548 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ANXA11P50995 505 aaKnown RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 MANFP55145 182 aaKnown RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ARF3P61204 181 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 BTN3A2P78410 334 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 DMWDQ09019 674 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 BIRC2Q13490 618 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ADRM1Q16186 407 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF630Q2M218 657 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 C6orf132Q5T0Z8 1188 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 TMTC4Q5T4D3 741 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 GCNT6Q5T4J0 391 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 PMS2CLQ68D20 193 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 HMBOX1Q6NT76 420 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 PPP4R4Q6NUP7 873 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 TMEM214Q6NUQ4 689 aaKnown RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 SLC48A1Q6P1K1 146 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 TLDC1Q6P9B6 456 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 CCDC80Q76M96 950 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF438Q7Z4V0 828 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 C10orf111Q8N326 155 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 METTL25Q8N6Q8 603 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 AMER3Q8N944 861 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 C19orf47Q8N9M1 422 aaKnown RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 SFXN5Q8TD22 340 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 GAB3Q8WWW8 586 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 TCTN2Q96GX1 697 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 PYURFQ96I23 114 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF570Q96NI8 536 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 TRAPPC9Q96Q05 1148 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 BDH2Q9BUT1 245 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 C9orf16Q9BUW7 83 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 CHID1Q9BWS9 393 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 SYNPO2LQ9H987 977 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 CLK4Q9HAZ1 481 aaKnown RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ENAMQ9NRM1 1142 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 SEMA3GQ9NS98 782 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 GIMAP4Q9NUV9 329 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 UTS2RQ9UKP6 389 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 CES1P1Q9UKY3 287 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 RAB26Q9ULW5 256 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 FAF1Q9UNN5 650 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF451Q9Y4E5 1061 aa10.44□□□□□ -0.74
VTI1A-204ENST00000480057 MDC1Q14676 2089 aaKnown RBP10.44□□□□□ -0.74
VTI1A-204ENST00000480057 RNF103-CHMP3A0A140T963 221 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 YKT6O15498 198 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CLOCKO15516 846 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 P2RX6O15547 441 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 LAMTOR5O43504 91 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 NUDT21O43809 227 aaKnown RBP10.43□□□□□ -0.74
VTI1A-204ENST00000480057 B3GALT2O43825 422 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 AIFM1O95831 613 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 NR2F6P10588 404 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 UQCRBP14927 111 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ALOX12P18054 663 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 EFNA1P20827 205 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CDH3P22223 829 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CERS1P27544 350 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 SOAT1P35610 550 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 BUD31P41223 144 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-204ENST00000480057 MAGEA2P43356 314 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 FNTBP49356 437 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ARRB1P49407 418 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CLCN2P51788 898 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 AQP4P55087 323 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 RAB8AP61006 207 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 SKP1P63208 163 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 TNFRSF17Q02223 184 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 NR1D2Q14995 579 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 OR52E8Q6IFG1 317 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 IRGCQ6NXR0 463 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 BHLHB9Q6PI77 547 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CBLL1Q75N03 491 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 EIF3MQ7L2H7 374 aaKnown RBP10.43□□□□□ -0.74
VTI1A-204ENST00000480057 SFTPA2Q8IWL1 248 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 MMP21Q8N119 569 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CSNK1A1LQ8N752 337 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ARL10Q8N8L6 244 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 KCT2Q8NC54 265 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 NETO1Q8TDF5 533 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 EXOSC8Q96B26 276 aaKnown RBP10.43□□□□□ -0.74
VTI1A-204ENST00000480057 TBC1D20Q96BZ9 403 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 SLC47A1Q96FL8 570 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF597Q96LX8 424 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF285Q96NJ3 590 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 AMDHD1Q96NU7 426 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ASPSCR1Q9BZE9 553 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CXorf36Q9H7Y0 433 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 CAAP1Q9H8G2 361 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 SLAMF7Q9NQ25 335 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 SIRT3Q9NTG7 399 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms