RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 MRPS33Q9Y291 106 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-218ENST00000479897 ATG4BQ9Y4P1 393 aa11.84□□□□□ -0.51
TRAPPC12-218ENST00000479897 PCDHA9Q9Y5H5 950 aa11.84□□□□□ -0.51
TRAPPC12-218ENST00000479897 COPG1Q9Y678 874 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-218ENST00000479897 A0A1W2PR48 441 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 SYNDIG1LA6NDD5 238 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 VSTM2BA6NLU5 285 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 STMND1H3BQB6 276 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 SCAMP2O15127 329 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 CCDC22O60826 627 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 FHP07954 510 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 CD63P08962 238 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 DDCP20711 480 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 PRPS1L1P21108 318 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 CPN2P22792 545 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 TLX1P31314 330 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 HPCAL1P37235 193 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 XCR1P46094 333 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 CLNS1AP54105 237 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 SHC2P98077 582 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 MAT1AQ00266 395 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 OR52E8Q6IFG1 317 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 C6orf15Q6UXA7 325 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 OVCH1Q7RTY7 1134 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 TIPARPQ7Z3E1 657 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 ZC3H7AQ8IWR0 971 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 ZNF595Q8IYB9 648 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 MIER2Q8N344 545 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 GLB1L3Q8NCI6 653 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 GALNT6Q8NCL4 622 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 CCDC197Q8NCU1 140 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 OR51Q1Q8NH59 317 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 COL26A1Q96A83 441 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 TBC1D20Q96BZ9 403 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 EGLN2Q96KS0 407 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 MARK4Q96L34 752 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 ZNF578Q96N58 590 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 CSF3RQ99062 836 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 SCNM1Q9BWG6 230 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 MYLK2Q9H1R3 596 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 CLMPQ9H6B4 373 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 WDR41Q9HAD4 459 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 SAR1AQ9NR31 198 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 LANCL2Q9NS86 450 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 TAS2R7Q9NYW3 318 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 TRPC4Q9UBN4 977 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 HEY2Q9UBP5 337 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 ZNF282Q9UDV7 671 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 NXT1Q9UKK6 140 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 FBXW2Q9UKT8 454 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 EXO1Q9UQ84 846 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 MSRB2Q9Y3D2 182 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 MAU2Q9Y6X3 613 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 WDFY3Q8IZQ1 3526 aa11.83□□□□□ -0.52
TRAPPC12-218ENST00000479897 C9J4A7 227 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 PSMD12O00232 456 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 BRINP1O60477 761 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 DNAJB6O75190 326 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 DCTN3O75935 186 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 BMP10O95393 424 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 ADRB1P08588 477 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 FURINP09958 794 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 RAB40ALP0C0E4 278 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 GPX3P22352 226 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 PPP2R1BP30154 601 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 STAT5AP42229 794 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 HSD17B7P56937 341 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 SF3A3Q12874 501 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 NCF4Q15080 339 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 SYT16Q17RD7 645 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 FAM91A1Q658Y4 838 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 SLC48A1Q6P1K1 146 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 QSOX2Q6ZRP7 698 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 R3HCC1LQ7Z5L2 792 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 DTX1Q86Y01 620 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 SCUBE1Q8IWY4 988 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 NLGN4XQ8N0W4 816 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 C7orf57Q8NEG2 295 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 NLGN4YQ8NFZ3 816 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 CLHC1Q8NHS4 586 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 PEX11GQ96HA9 241 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 SPSB2Q99619 263 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 DPY30Q9C005 99 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 NMUR2Q9GZQ4 415 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 CHST8Q9H2A9 424 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 REEP4Q9H6H4 257 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 RPF2Q9H7B2 306 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 IFT80Q9P2H3 777 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 CTSFQ9UBX1 484 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 BAIAP2L1Q9UHR4 511 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 ATP6V1HQ9UI12 483 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 CES1P1Q9UKY3 287 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 PADI1Q9ULC6 663 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 MMACHCQ9Y4U1 282 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 CROCCQ5TZA2 2017 aa11.82□□□□□ -0.52
TRAPPC12-218ENST00000479897 CCDC88CQ9P219 2028 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms