RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	RELL1	Q8IUW5	271 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SLC34A3	Q8N130	599 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ACOT4	Q8N9L9	421 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	POGLUT1	Q8NBL1	392 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	MORN4	Q8NDC4	146 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	OR14A16	Q8NHC5	309 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ZNF473	Q8WTR7	871 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ATP6V1E2	Q96A05	226 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	FMO2	Q99518	471 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	MS4A8	Q9BY19	250 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	RUBCNL	Q9H714	662 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	NINJ2	Q9NZG7	142 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	CPSF2	Q9P2I0	782 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	PPIE	Q9UNP9	301 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ERVK-11	Q9UQG0	969 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	YARS2	Q9Y2Z4	477 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SVIL	O95425	2214 aa		11.5	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ASPDH	A6ND91	283 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	NPIPA5	E9PKD4	350 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	NME2P1	O60361	137 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	UGDH	O60701	494 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SLC19A2	O60779	497 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ZG16	O60844	167 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SMIM24	O75264	130 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SH3BGRL	O75368	114 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ITGA10	O75578	1167 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	CLDN1	O95832	211 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	TBX6	O95947	436 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ZNF24	P17028	368 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	NME2	P22392	152 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	CPN2	P22792	545 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	CNTF	P26441	200 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	PPP2R1B	P30154	601 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	GMPR	P36959	345 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ST13	P50502	369 aa	Known RBP	11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SSR4	P51571	173 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	IRF9	Q00978	393 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SLAMF1	Q13291	335 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	E2F2	Q14209	437 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	NAA30	Q147X3	362 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ADNP2	Q6IQ32	1131 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	HSDL2	Q6YN16	418 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	GPALPP1	Q8IXQ4	340 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	CENPL	Q8N0S6	344 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	CYP4Z2P	Q8N1L4	340 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ARMC10	Q8N2F6	343 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	APCDD1L	Q8NCL9	501 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	OR5L2	Q8NGL0	311 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	HUS1B	Q8NHY5	278 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	NCLN	Q969V3	563 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	RBM18	Q96H35	190 aa	Known RBP	11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SCYL1	Q96KG9	808 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	GPR137	Q96N19	417 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	HES7	Q9BYE0	225 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	IPPK	Q9H8X2	491 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	TIMMDC1	Q9NPL8	285 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	KCMF1	Q9P0J7	381 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	COPS7A	Q9UBW8	275 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	VTI1B	Q9UEU0	232 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	PHF11	Q9UIL8	331 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	NPIPA1	Q9UND3	350 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ASB1	Q9Y576	335 aa		11.49	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SCN2A	Q99250	2005 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SAP18	O00422	153 aa	Known RBP	11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ASNA1	O43681	348 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	COL6A2	P12110	1019 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	MTHFD2	P13995	350 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	CA7	P43166	264 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	HNRNPF	P52597	415 aa	Known RBP	11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SMS	P52788	366 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ARFIP1	P53367	373 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	GTF2H2	Q13888	395 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	5e-10	■■■□□ 16.8
CDK5RAP2-211	ENST00000479584	TSNAXIP1	Q2TAA8	658 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	GTF2H2C	Q6P1K8	395 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	RPTN	Q6XPR3	784 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	UBE3D	Q7Z6J8	389 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	GPR180	Q86V85	440 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SPPL2C	Q8IUH8	684 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	EID3	Q8N140	333 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	GHDC	Q8N2G8	530 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	TMEM52	Q8NDY8	209 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	KIF18A	Q8NI77	898 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SLC44A1	Q8WWI5	657 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	ASB15	Q8WXK1	588 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	TANK	Q92844	425 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	FRMD6	Q96NE9	622 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	MTERF1	Q99551	399 aa	Known RBP	11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	MAPKAP1	Q9BPZ7	522 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	OR8D2	Q9GZM6	311 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	OR51B5	Q9H339	312 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	SH3BGRL2	Q9UJC5	107 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	TSC22D4	Q9Y3Q8	395 aa		11.48	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584		A0A087WUV0	522 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	HMX2	A2RU54	273 aa		11.47	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584		A8MVJ9	347 aa		11.47	□□□□□ -0.57
CDK5RAP2-211	ENST00000479584	C17orf105	B2RV13	164 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms