RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 LRRC70Q7Z2Q7 622 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ADCK2Q7Z695 626 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 CLEC14AQ86T13 490 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 C17orf64Q86WR6 236 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 FAM129CQ86XR2 697 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 DCBLD1Q8N8Z6 715 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 SNX31Q8N9S9 440 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 LINC01555Q8NAE3 123 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 OR56A3Q8NH54 315 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 WDR36Q8NI36 951 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 RDH11Q8TC12 318 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 FNDC8Q8TC99 324 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PHOSPHO1Q8TCT1 267 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 DENND1AQ8TEH3 1009 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PPP4R1Q8TF05 950 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 GIMAP1Q8WWP7 306 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ZUFSPQ96AP4 578 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 PTERQ96BW5 349 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 RHBDF1Q96CC6 855 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ATOH8Q96SQ7 321 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 MAP3K3Q99759 626 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 RNF32Q9H0A6 362 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ATG10Q9H0Y0 220 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ZNF768Q9H5H4 540 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 CLK4Q9HAZ1 481 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 KCNK9Q9NPC2 374 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 ACSS2Q9NR19 701 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 DNAJC11Q9NVH1 559 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 RIC8BQ9NVN3 520 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 C14orf119Q9NWQ9 140 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 GIN1Q9NXP7 522 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 GPRC5BQ9NZH0 403 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 OPTCQ9UBM4 332 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 TAC3Q9UHF0 121 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 SNX7Q9UNH6 387 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 STK38LQ9Y2H1 464 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 FAM32AQ9Y421 112 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 KCNE2Q9Y6J6 123 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 RP1P56715 2156 aa5.91□□□□□ -1.46
SF3B1-209ENST00000479532 RIF1Q5UIP0 2472 aaKnown RBP5.91□□□□□ -1.46
SF3B1-209ENST00000479532 LAMA1P25391 3075 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 UNC13CQ8NB66 2214 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PTPRZ1P23471 2315 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 A0A088AWK7 358 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 TCRBV5S2A0A599 114 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ARHGAP10A1A4S6 786 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 FAM90A27PA6NNH2 459 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 E9PBE3 544 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 STX16-NPEPL1H3BU86 382 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 K7EPI3 171 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 STX16O14662 325 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 TM9SF1O15321 606 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ZWINTO95229 277 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 NELFEP18615 380 aaKnown RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ATP5F1P24539 256 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 CXCR2P25025 360 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 GGT5P36269 586 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ARL1P40616 181 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 HSPA7P48741 367 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 CCR8P51685 355 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PRKAA2P54646 552 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PRDX1Q06830 199 aaKnown RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ZFP36L1Q07352 338 aaKnown RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 CDC16Q13042 620 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 TARDBPQ13148 414 aaKnown RBP eCLIP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PDK4Q16654 411 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 HIST2H2ACQ16777 129 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PTCHD3Q3KNS1 767 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PAGE2BQ5JRK9 111 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 DEPDC1Q5TB30 811 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 HIST2H2AA3Q6FI13 130 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 FIGLAQ6QHK4 219 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 MBOAT1Q6ZNC8 495 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 RAB11FIP2Q7L804 512 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 MILR1Q7Z6M3 343 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 THOC6Q86W42 341 aaKnown RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 KLHDC8AQ8IYD2 350 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 KRT78Q8N1N4 520 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 CHCHD4Q8N4Q1 142 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PTGR2Q8N8N7 351 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 BANPQ8N9N5 519 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ZNF610Q8N9Z0 462 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 LMNTD1Q8N9Z9 388 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 OR2L3Q8NG85 312 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 OR8K5Q8NH50 307 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ABHD4Q8TB40 342 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 UBTD2Q8WUN7 234 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 SLC5A11Q8WWX8 675 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ATP6V1E2Q96A05 226 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 RERGQ96A58 199 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PYCR2Q96C36 320 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 DGCR14Q96DF8 476 aaKnown RBP5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PHF21BQ96EK2 531 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 PEX11GQ96HA9 241 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 LRGUKQ96M69 825 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 GPR78Q96P69 363 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 OR2A14Q96R47 310 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ZPBPQ9BS86 351 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 ACAT2Q9BWD1 397 aa5.9□□□□□ -1.46
SF3B1-209ENST00000479532 SGPP1Q9BX95 441 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms