RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 CDKL1Q00532 357 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 TSNQ15631 228 aaKnown RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 NDUFAF5Q5TEU4 345 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 TRIM40Q6P9F5 258 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 HSDL2Q6YN16 418 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 RGS9BPQ6ZS82 235 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 FRA10AC1Q70Z53 315 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 ZZZ3Q8IYH5 903 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 CLYBLQ8N0X4 340 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 TMEM132CQ8N3T6 1108 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 OR2L5Q8NG80 312 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 PTPMT1Q8WUK0 201 aaPredicted RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 ANKRD49Q8WVL7 239 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 SLCO2A1Q92959 643 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 FAM173AQ9BQD7 235 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 NAT9Q9BTE0 207 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 CNPPD1Q9BV87 410 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 DDX47Q9H0S4 455 aaKnown RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 LIME1Q9H400 295 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 COPS7BQ9H9Q2 264 aaPredicted RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 IL1RL2Q9HB29 575 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 SEMA4BQ9NPR2 832 aaPredicted RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 DNAJB12Q9NXW2 375 aaKnown RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 TUBA8Q9NY65 449 aaPredicted RBP11.11□□□□□ -0.63
GCA-208ENST00000479199 DAPP1Q9UN19 280 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
GCA-208ENST00000479199 NIPBLQ6KC79 2804 aaeCLIP11.1□□□□□ -0.63
GCA-208ENST00000479199 A0A088AWK7 358 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 GOLGA6L10A0A0M3HER8 536 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 A0A1B0GVC2 190 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 FAM95CA0A1B0GW59 222 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 C17orf105B2RV13 164 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 AQP7O14520 342 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 PRAMEF4O60810 478 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 LDB3O75112 727 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 CLEC3AO75596 197 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 HOXB4P17483 251 aaPredicted RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 ZNF10P21506 573 aaPredicted RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 CNR1P21554 472 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 MAN2A2P49641 1150 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 MTTPP55157 894 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 TAS2R39P59534 338 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 RNF4P78317 190 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 ID2Q02363 134 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 FOLH1Q04609 750 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 FOXO1Q12778 655 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 ADPRMQ3LIE5 342 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 FBXO48Q5FWF7 155 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 C1orf185Q5T7R7 199 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 PRAMEF9Q5VWM5 478 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 STEAP4Q687X5 459 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 ABHD17CQ6PCB6 329 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 WDR53Q7Z5U6 358 aaPredicted RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 ADAMTSL2Q86TH1 951 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 ZC3HC1Q86WB0 502 aaKnown RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 TGIF2LYQ8IUE0 185 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 MORN4Q8NDC4 146 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 TTLQ8NG68 377 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 OR14A16Q8NHC5 309 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 SLC2A12Q8TD20 617 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 RHBDF1Q96CC6 855 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 CAPZA3Q96KX2 299 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 SERINC2Q96SA4 455 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 NAP1L3Q99457 506 aaPredicted RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 FOXC2Q99958 501 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 GPATCH1Q9BRR8 931 aaKnown RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 TMEM79Q9BSE2 394 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 POLDIP3Q9BY77 421 aaKnown RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 ALOXE3Q9BYJ1 711 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 REXO4Q9GZR2 422 aaKnown RBP11.1□□□□□ -0.63
GCA-208ENST00000479199 CXXC4Q9H2H0 198 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 SACM1LQ9NTJ5 587 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 ZNF358Q9NW07 568 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 SPRR3Q9UBC9 169 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 JRKLQ9Y4A0 524 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 ATG4BQ9Y4P1 393 aa11.1□□□□□ -0.63
GCA-208ENST00000479199 WDR1O75083 606 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 H2AFYO75367 372 aaKnown RBP11.09□□□□□ -0.63
GCA-208ENST00000479199 CTAG2O75638 210 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 KLK2P20151 261 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 GSTM2P28161 218 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 HNMTP50135 292 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 STX4Q12846 297 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 CEBPEQ15744 281 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 ZNF793Q6ZN11 406 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 ANKMY2Q8IV38 441 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 LRRC8AQ8IWT6 810 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 KRT78Q8N1N4 520 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 NKAPQ8N5F7 415 aaKnown RBP11.09□□□□□ -0.63
GCA-208ENST00000479199 GOLM1Q8NBJ4 401 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 NINJ1Q92982 152 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 RUNDC3BQ96NL0 473 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 F2RL3Q96RI0 385 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 LDAHQ9H6V9 325 aa11.09□□□□□ -0.63
GCA-208ENST00000479199 EXO5Q9H790 373 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms