RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 GIN1Q9NXP7 522 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 SAGE1Q9NXZ1 904 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 MARK1Q9P0L2 795 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 SCHIP1Q9P0W5 487 aaPredicted RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 NFKBIL1Q9UBC1 381 aaPredicted RBP10.31□□□□□ -0.76
VPS52-217ENST00000478934 PSORS1C1Q9UIG5 152 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 HSPE1-MOB4S4R3N1 261 aa10.31□□□□□ -0.76
VPS52-217ENST00000478934 TRBV4-1A0A0J9YWV2 114 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 TMEM221A6NGB7 291 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 FOXE1O00358 373 aaPredicted RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 QSOX1O00391 747 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 DSCR3O14972 297 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 NME6O75414 186 aaPredicted RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 SOX14O95416 240 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 PCCBP05166 539 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 BMPR1AP36894 532 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 TMED10P49755 219 aaKnown RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 LIM2P55344 173 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ZNF33BQ06732 778 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 PCDH1Q08174 1060 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 HSPB3Q12988 150 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 MADCAM1Q13477 382 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 NUMA1Q14980 2115 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 MED22Q15528 200 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 GAB4Q2WGN9 574 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 PRAMEF14Q5SWL7 426 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 C1orf53Q5VUE5 145 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 PRAMEF13Q5VWM6 474 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 STEAP3Q658P3 488 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 STX19Q8N4C7 294 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 AQP11Q8NBQ7 271 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 S100ZQ8WXG8 99 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 SLC38A4Q969I6 547 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 EFCAB11Q9BUY7 163 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ZNF717Q9BY31 904 aaPredicted RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 OR52A5Q9H2C5 316 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ATAD3AQ9NVI7 634 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ANKDD1BA6NHY2 528 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 SSX4O60224 188 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 DNAJB5O75953 348 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 BCHEP06276 602 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ADORA3P0DMS8 318 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ALPPL2P10696 532 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 HOXB3P14651 431 aaPredicted RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 CTSKP43235 329 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 TPTEP56180 551 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 ZNF234Q14588 700 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 TEAD4Q15561 434 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 BCL7AQ4VC05 210 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 HIST2H2AA3Q6FI13 130 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 CEACAM20Q6UY09 585 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 SPATC1Q76KD6 591 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 COMTD1Q86VU5 262 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 MEX3DQ86XN8 651 aaKnown RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 VANGL1Q8TAA9 524 aaPredicted RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 PHF10Q8WUB8 498 aaKnown RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 STARD8Q92502 1023 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 EXOSC8Q96B26 276 aaKnown RBP10.3□□□□□ -0.76
VPS52-217ENST00000478934 REPS1Q96D71 796 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 IL4I1Q96RQ9 567 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 EHD1Q9H4M9 534 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 XKR8Q9H6D3 395 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 INSL6Q9Y581 213 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 IRAK3Q9Y616 596 aa10.3□□□□□ -0.76
VPS52-217ENST00000478934 GLOD5A6NK44 160 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 ADAMDEC1O15204 470 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 TPST2O60704 377 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 DLGAP3O95886 979 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 SERPIND1P05546 499 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 CHRM5P08912 532 aaPredicted RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 GABRB1P18505 474 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 PPIBP23284 216 aaKnown RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 DDX6P26196 483 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS52-217ENST00000478934 EIF2DP41214 584 aaKnown RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 XCR1P46094 333 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 PTGES3Q15185 160 aaKnown RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 SEC23BQ15437 767 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 HNRNPA1L2Q32P51 320 aaKnown RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 ZNF404Q494X3 552 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 ARMCX4Q5H9R4 360 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 SZRD1Q7Z422 152 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 SLC9B2Q86UD5 537 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 HEATR4Q86WZ0 1026 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 FAM129CQ86XR2 697 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 LYSMD2Q8IV50 215 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 NRSN1Q8IZ57 195 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 CELF5Q8N6W0 485 aaKnown RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 Q8N9G6 341 aaPredicted RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 POC5Q8NA72 575 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 B3GNT7Q8NFL0 401 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 OR4D11Q8NGI4 311 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 SLC38A5Q8WUX1 472 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 TFGQ92734 400 aaPredicted RBP10.29□□□□□ -0.76
VPS52-217ENST00000478934 WDR34Q96EX3 536 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 KCNS3Q9BQ31 491 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 CCNB1IP1Q9NPC3 277 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 MYNNQ9NPC7 610 aa10.29□□□□□ -0.76
VPS52-217ENST00000478934 C11orf16Q9NQ32 467 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms