RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 UBXN1Q04323 297 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 PPP2R5CQ13362 524 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 OPCMLQ14982 345 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 KIAA1644Q3SXP7 199 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC39A12Q504Y0 691 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC25A53Q5H9E4 307 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TTC27Q6P3X3 843 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TMEM270Q6UE05 265 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CEACAM20Q6UY09 585 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF497Q6ZNH5 498 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC16A9Q7RTY1 509 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CPEB2Q7Z5Q1 589 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 APOBEC3FQ8IUX4 373 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 KLHDC8AQ8IYD2 350 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 KIRREL3Q8IZU9 778 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 PRSS35Q8N3Z0 413 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 KLHDC1Q8N7A1 406 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 GPATCH11Q8N954 259 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TRIM58Q8NG06 486 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 HPSE2Q8WWQ2 592 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 PIK3R3Q92569 461 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 DYRK2Q92630 601 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF524Q96C55 264 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZBED3Q96IU2 234 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 RASL10BQ96S79 203 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 CDCA3Q99618 268 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 LITAFQ99732 161 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC5A7Q9GZV3 580 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 THAP2Q9H0W7 228 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 RIMS4Q9H426 269 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 C10orf88Q9H8K7 445 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 RNPEPL1Q9HAU8 725 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 INTS9Q9NV88 658 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 C19orf25Q9UFG5 118 aaPredicted RBP3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 TNNQ9UQP3 1299 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 PCDHGA1Q9Y5H4 931 aa3.56□□□□□ -1.84
CDC42BPA-212ENST00000478573 RFX7Q2KHR2 1363 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 PFASO15067 1338 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 SALL1Q9NSC2 1324 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 RLFQ13129 1914 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 ALPK3Q96L96 1907 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 FAM149AA5PLN7 773 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 DDX39AO00148 427 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 ZNF197O14709 1029 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 SCO2O43819 266 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 ATP9AO75110 1047 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 GLCEO94923 617 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 PNPP00491 289 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 VTNP04004 478 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 YES1P07947 543 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 UBTFL1P0CB47 393 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 SP9P0CG40 484 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 KRT5P13647 590 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 LHCGRP22888 699 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 DUTP33316 252 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 CETN2P41208 172 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 MAGEA11P43364 429 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 CDR2Q01850 454 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 ACTN3Q08043 901 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 SQLEQ14534 574 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 LASP1Q14847 261 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 RPS6KA1Q15418 735 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC1A5Q15758 541 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 AARDQ4LEZ3 155 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 LCN1P1Q5VSP4 162 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 PRUNE1Q86TP1 453 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 CCDC83Q8IWF9 413 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 AQP12AQ8IXF9 295 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 KRT35Q92764 455 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 GIMAP5Q96F15 307 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 BTBD9Q96Q07 612 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 ATP6V0BQ99437 205 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 C17orf62Q9BQA9 187 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 FSD1Q9BTV5 496 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 FAM49AQ9H0Q0 323 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 CD209Q9NNX6 404 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 MYOZ2Q9NPC6 264 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 MRPL17Q9NRX2 175 aaKnown RBP3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 C2orf42Q9NWW7 574 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 SPG21Q9NZD8 308 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 TRPC4Q9UBN4 977 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 IL36AQ9UHA7 158 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 KCNJ14Q9UNX9 436 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 AGTPBP1Q9UPW5 1226 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 R4GN57 208 aa3.55□□□□□ -1.84
CDC42BPA-212ENST00000478573 MSGN1A6NI15 193 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 BLOC1S5-TXNDC5H3BN57 136 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 PCDH7O60245 1069 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 CRCPO75575 148 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 AKAP3O75969 853 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 EML2O95834 649 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 OLFM2O95897 454 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 NGFP01138 241 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 ATP1B1P05026 303 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 DLATP10515 647 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 HLA-DPA1P20036 260 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 SSTR1P30872 391 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 NF2P35240 595 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 MAP2K2P36507 400 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms