RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 RFNGQ9Y644 331 aa0.24□□□□□ -2.37
CALD1-218ENST00000478075 RPS6KL1Q9Y6S9 549 aa0.24□□□□□ -2.37
CALD1-218ENST00000478075 COL27A1Q8IZC6 1860 aaPredicted RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 SLC15A5A6NIM6 579 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 J3QKU1 62 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 AP3D1O14617 1153 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 IPO8O15397 1037 aaKnown RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 KIF5CO60282 957 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 RECQL5O94762 991 aaPredicted RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 C6orf47O95873 294 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 MT-ND2P03891 347 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 SERPING1P05155 500 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 SNRPCP09234 159 aaKnown RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 SBK2P0C263 348 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 LAMP2P13473 410 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 FOSL2P15408 326 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 IGFBP3P17936 291 aaPredicted RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 GABRR1P24046 479 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 ASCL1P50553 236 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 CDH13P55290 713 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 PDE7AQ13946 482 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 TSPO2Q5TGU0 170 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 C15orf52Q6ZUT6 534 aaKnown RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 DET1Q7L5Y6 550 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 MOB1BQ7L9L4 216 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 TMEM179BQ7Z7N9 219 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 PRUNE1Q86TP1 453 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 HEATR4Q86WZ0 1026 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 BLOC1S5Q8TDH9 187 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 SCFD2Q8WU76 684 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 MARC2Q969Z3 335 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 RBM41Q96IZ5 413 aaKnown RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 CDHR1Q96JP9 859 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 MPHOSPH6Q99547 160 aaKnown RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 RIOK1Q9BRS2 568 aaKnown RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 MLXQ9UH92 298 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 CPSF3Q9UKF6 684 aaKnown RBP0.23□□□□□ -2.37
CALD1-218ENST00000478075 PPIAL4AQ9Y536 164 aa0.23□□□□□ -2.37
CALD1-218ENST00000478075 COL11A1P12107 1806 aaPredicted RBP0.22□□□□□ -2.37
CALD1-218ENST00000478075 SDK2Q58EX2 2172 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 GPR75-ASB3A0A0A6YYF3 556 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 ANHXE9PGG2 379 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 PTGESO14684 152 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 NBR2O15453 112 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 MMP23AO75900 390 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 FCGR3AP08637 254 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 CCDC159P0C7I6 412 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 CD22P20273 847 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 CCT5P48643 541 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 PRPF4BQ13523 1007 aaKnown RBP0.22□□□□□ -2.37
CALD1-218ENST00000478075 SLC10A1Q14973 349 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 RBBP7Q16576 425 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 ANKRD55Q3KP44 614 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 ZNF528Q3MIS6 628 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 LRRC37A5PQ49AS3 106 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 TTC27Q6P3X3 843 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 COX8CQ7Z4L0 72 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 WDTC1Q8N5D0 677 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 LINC00304Q8N9R0 145 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 ZNF671Q8TAW3 534 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 RFFLQ8WZ73 363 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 LPGAT1Q92604 370 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 SAT2Q96F10 170 aaPredicted RBP0.22□□□□□ -2.37
CALD1-218ENST00000478075 KLF6Q99612 283 aaPredicted RBP0.22□□□□□ -2.37
CALD1-218ENST00000478075 NXF3Q9H4D5 531 aaKnown RBP0.22□□□□□ -2.37
CALD1-218ENST00000478075 TBC1D22BQ9NU19 505 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 RRN3Q9NYV6 651 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 LRP4O75096 1905 aa0.22□□□□□ -2.37
CALD1-218ENST00000478075 LOC100509620A0A075B734 347 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 OR2A25A4D2G3 310 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 A6NLC8 198 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 RNF212BA8MTL3 300 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 NPHP1O15259 732 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 PIP5K1CO60331 668 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 GSRP00390 522 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 LINGO3P0C6S8 592 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 PFKFB1P16118 471 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 DNASE1P24855 282 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 BACE1P56817 501 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 RPS8P62241 208 aaKnown RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 SRSF5Q13243 272 aaKnown RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 RPS6KA1Q15418 735 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 TSTQ16762 297 aaKnown RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 C10orf62Q5T681 223 aaPredicted RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 IKBIPQ70UQ0 350 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 ZNF709Q8N972 641 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 C1orf131Q8NDD1 294 aaKnown RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 MDS2Q8NDY4 140 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 MCUQ8NE86 351 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 BBS1Q8NFJ9 593 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 IL17REQ8NFR9 667 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 OR2L8Q8NGY9 312 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 TFB1MQ8WVM0 346 aaKnown RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 SEPT1Q8WYJ6 367 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 PIWIL1Q96J94 861 aaKnown RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 NMNAT2Q9BZQ4 307 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 TRIM7Q9C029 511 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 ELL3Q9HB65 397 aaPredicted RBP0.21□□□□□ -2.38
CALD1-218ENST00000478075 SLC35C2Q9NQQ7 365 aa0.21□□□□□ -2.38
CALD1-218ENST00000478075 PRMT7Q9NVM4 692 aaPredicted RBP0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms