RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SH3BP4Q9P0V3 963 aa12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 NDRG4Q9ULP0 352 aaKnown RBP12.14□□□□□ -0.47
RTFDC1-207ENST00000477573 TEX13CA0A0J9YWL9 993 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 LOC100506127A0A0U1RQW1 187 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 FXYD1O00168 92 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 QSOX1O00391 747 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 UBE2CO00762 179 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 FGF10O15520 208 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 PAK4O96013 591 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 C9P02748 559 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 CXCL10P02778 98 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 GP1BAP07359 652 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 SLC11A1P49279 550 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ELP6Q0PNE2 266 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ILKQ13418 452 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 RAPSNQ13702 412 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 SEC23BQ15437 767 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 FBXO48Q5FWF7 155 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ESRP1Q6NXG1 681 aaKnown RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 UXS1Q8NBZ7 420 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 C2orf15Q8WU43 125 aaKnown RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 SFXN2Q96NB2 322 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 VAT1Q99536 393 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 SEPHS2Q99611 448 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 VRK1Q99986 396 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 KCNS3Q9BQ31 491 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 GPR61Q9BZJ8 451 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 MED28Q9H204 178 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 SMURF2Q9HAU4 748 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 MED11Q9P086 117 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 MAP10Q9P2G4 905 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 AASSQ9UDR5 926 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ATXN7L1Q9ULK2 861 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 STUB1Q9UNE7 303 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 IQCMA0A1B0GVH7 501 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 A0A1W2PQH9 124 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 I6L893 689 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 IFNGP01579 166 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 NMBP08949 121 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 AZGP1P25311 298 aaKnown RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ETV5P41161 510 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 KCNQ1P51787 676 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 HNRNPKP61978 463 aaKnown RBP eCLIP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 DSC2Q02487 901 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 CHRNB3Q05901 458 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 EIF4EBP2Q13542 120 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 TPGS2Q68CL5 300 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF527Q8NB42 609 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 AGAP2Q99490 1192 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 CPNE1Q99829 537 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 WDR77Q9BQA1 342 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 APOL2Q9BQE5 337 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 CRB3Q9BUF7 120 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 RBCK1Q9BYM8 510 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 GPR62Q9BZJ7 368 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 MVB12BQ9H7P6 319 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 GALNT9Q9HCQ5 603 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 SLC22A11Q9NSA0 550 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 KLHL8Q9P2G9 620 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 MAGEL2Q9UJ55 1249 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF638Q14966 1978 aaKnown RBP12.13□□□□□ -0.47
RTFDC1-207ENST00000477573 TO15178 435 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 KIAA0513O60268 411 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CREG1O75629 220 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 GADD45GO95257 159 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 MT-CYBP00156 380 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 GALTP07902 379 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 EDN3P14138 238 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 TMEM11P17152 192 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 GJA1P17302 382 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CALCRP30988 508 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CASP6P55212 293 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 HTRA3P83110 453 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 TP53BP2Q13625 1128 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 MAPKAPK3Q16644 382 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 SPOUT1Q5T280 376 aaKnown RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM131AQ6UXB0 335 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 PID1Q7Z2X4 250 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 TMEM132CQ8N3T6 1108 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 ATPAF2Q8N5M1 289 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 TMEM125Q96AQ2 219 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 LRRC58Q96CX6 371 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 SCLYQ96I15 445 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 PGLYRP2Q96PD5 576 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 SLC29A3Q9BZD2 475 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms