RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 GAB1Q13480 694 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 BMPR2Q13873 1038 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 GBX1Q14549 363 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 RPS6KA1Q15418 735 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 ELAVL1Q15717 326 aaKnown RBP6.73□□□□□ -1.33
PRPF3-205ENST00000476970 PARP6Q2NL67 630 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 KLHL38Q2WGJ6 581 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 DARS2Q6PI48 645 aaKnown RBP6.73□□□□□ -1.33
PRPF3-205ENST00000476970 C12orf54Q6X4T0 127 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 SCUBE1Q8IWY4 988 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 KATNAL2Q8IYT4 538 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 RCOR2Q8IZ40 523 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 OTUD6BQ8N6M0 293 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 C9orf106Q8NAJ2 232 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 OR14A16Q8NHC5 309 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 ACTL9Q8TC94 416 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 SLC22A8Q8TCC7 542 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 PAQR8Q8TEZ7 354 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 CAVIN3Q969G5 261 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 JSRP1Q96MG2 331 aaPredicted RBP6.73□□□□□ -1.33
PRPF3-205ENST00000476970 QRFPRQ96P65 431 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 PACSIN1Q9BY11 444 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 ANGPTL4Q9BY76 406 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 RHBGQ9H310 441 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 LIN28AQ9H9Z2 209 aaKnown RBP6.73□□□□□ -1.33
PRPF3-205ENST00000476970 KLHL28Q9NXS3 571 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 CNIH4Q9P003 139 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.73□□□□□ -1.33
PRPF3-205ENST00000476970 CLCA3PQ9Y6N3 262 aa6.73□□□□□ -1.33
PRPF3-205ENST00000476970 MALRD1Q5VYJ5 2156 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 A0A0G2JK05 382 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ERI2A8K979 691 aaKnown RBP6.72□□□□□ -1.33
PRPF3-205ENST00000476970 E5RI56 91 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 MSTNO14793 375 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 CD3EAPO15446 510 aaKnown RBP6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ZBTB14O43829 449 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 TRAPPC6AO75865 159 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 RCBTB2O95199 551 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ESR1P03372 595 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 IFNA16P05015 189 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 SERPIND1P05546 499 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 COMTP21964 271 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ADRA1DP25100 572 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 IMPA1P29218 277 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 CD79BP40259 229 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 CASP9P55211 416 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 RNF4P78317 190 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 SLC13A2Q13183 592 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 IQCB1Q15051 598 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 SLC18A3Q16572 532 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 MPEG1Q2M385 716 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 TTLL9Q3SXZ7 439 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 BEX5Q5H9J7 111 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 NHSL2Q5HYW2 709 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 TBCELQ5QJ74 424 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 UBAP2Q5T6F2 1119 aaKnown RBP6.72□□□□□ -1.33
PRPF3-205ENST00000476970 PRAMEF20Q5VT98 475 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 VASNQ6EMK4 673 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ZNF704Q6ZNC4 412 aaPredicted RBP6.72□□□□□ -1.33
PRPF3-205ENST00000476970 LRRC56Q8IYG6 542 aaPredicted RBP6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ZNF611Q8N823 705 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 TC2NQ8N9U0 490 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 MORN4Q8NDC4 146 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 SGMS2Q8NHU3 365 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ZPLD1Q8TCW7 415 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 SPACA9Q96E40 222 aaPredicted RBP6.72□□□□□ -1.33
PRPF3-205ENST00000476970 WFIKKN1Q96NZ8 548 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 FAM111AQ96PZ2 611 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 DOHHQ9BU89 302 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 HSD3B7Q9H2F3 369 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 TSPY26PQ9H489 355 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 PRTFDC1Q9NRG1 225 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 COPS7AQ9UBW8 275 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 SLC2A6Q9UGQ3 507 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 ZNF148Q9UQR1 794 aa6.72□□□□□ -1.33
PRPF3-205ENST00000476970 A8MXE2 369 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 HS3ST1O14792 307 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 OR1F1O43749 312 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 NRDCO43847 1150 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 LCMT2O60294 686 aaKnown RBP6.71□□□□□ -1.34
PRPF3-205ENST00000476970 DLX3O60479 287 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 NIPSNAP2O75323 286 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 TPM1P09493 284 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 CDH1P12830 882 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 HNF1AP20823 631 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 CHMP24386 653 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 CFPP27918 469 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 SKIV2L2P42285 1042 aaKnown RBP6.71□□□□□ -1.34
PRPF3-205ENST00000476970 CCR8P51685 355 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 COPS2P61201 443 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 CCZ1BP86790 482 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 CCZ1P86791 482 aaPredicted RBP6.71□□□□□ -1.34
PRPF3-205ENST00000476970 FOXF2Q12947 444 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 KCNJ11Q14654 390 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 CTSL3PQ5NE16 218 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 PPP1R21Q6ZMI0 780 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 STRA8Q7Z7C7 330 aa6.71□□□□□ -1.34
PRPF3-205ENST00000476970 MEX3DQ86XN8 651 aaKnown RBP6.71□□□□□ -1.34
PRPF3-205ENST00000476970 REXO1L1PQ8IX06 675 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms