RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 TMEM233B4DJY2 109 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 FOXE1O00358 373 aaPredicted RBP11.65□□□□□ -0.54
APTX-220ENST00000476858 SUV39H1O43463 412 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 FGF17O60258 216 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 PRKNO60260 465 aaPredicted RBP11.65□□□□□ -0.54
APTX-220ENST00000476858 CHRNGP07510 517 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 PTX3P26022 381 aaPredicted RBP11.65□□□□□ -0.54
APTX-220ENST00000476858 PTGER1P34995 402 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 SOX11P35716 441 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 ETV4P43268 484 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 RAP1GDS1P52306 607 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 HMGCS1Q01581 520 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 LCP2Q13094 533 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 AP5B1Q2VPB7 878 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 BTBD16Q32M84 506 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 ZNF750Q32MQ0 723 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 CCDC153Q494R4 210 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 TTC19Q6DKK2 380 aaPredicted RBP11.65□□□□□ -0.54
APTX-220ENST00000476858 CLEC6AQ6EIG7 209 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 QSOX2Q6ZRP7 698 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 PRICKLE2Q7Z3G6 844 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 SLC22A9Q8IVM8 553 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 CATSPER1Q8NEC5 780 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 SELENOMQ8WWX9 145 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 METTL21AQ8WXB1 218 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 RGMAQ96B86 450 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 NACC2Q96BF6 587 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 NPLQ9BXD5 320 aaPredicted RBP11.65□□□□□ -0.54
APTX-220ENST00000476858 ACPTQ9BZG2 426 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 LHPPQ9H008 270 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 COPS7BQ9H9Q2 264 aaPredicted RBP11.65□□□□□ -0.54
APTX-220ENST00000476858 MID1IP1Q9NPA3 183 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 PRDM9Q9NQV7 894 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 SLC12A4Q9UP95 1085 aa11.65□□□□□ -0.54
APTX-220ENST00000476858 HRKO00198 91 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
APTX-220ENST00000476858 PGRMC2O15173 223 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 AIFM1O95831 613 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 SERPINA7P05543 415 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 KLK1P06870 262 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 PLA2G2AP14555 144 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 MLLT10P55197 1068 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 SLC26A5P58743 744 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 DNAJB13P59910 316 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 RAE1P78406 368 aaKnown RBP11.64□□□□□ -0.55
APTX-220ENST00000476858 C19orf57Q0VDD7 668 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 CUL3Q13618 768 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 PLEKHN1Q494U1 663 aaPredicted RBP11.64□□□□□ -0.55
APTX-220ENST00000476858 VWA5B1Q5TIE3 1220 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 FAM180BQ6P0A1 224 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 C16orf47Q6ZP98 133 aaPredicted RBP11.64□□□□□ -0.55
APTX-220ENST00000476858 KBTBD2Q8IY47 623 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 METTL4Q8N3J2 472 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 METTL6Q8TCB7 284 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 PPWD1Q96BP3 646 aaKnown RBP11.64□□□□□ -0.55
APTX-220ENST00000476858 APIPQ96GX9 242 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 TUBB6Q9BUF5 446 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 ELOVL6Q9H5J4 265 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 DDX31Q9H8H2 851 aaKnown RBP11.64□□□□□ -0.55
APTX-220ENST00000476858 LYRM4Q9HD34 91 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 PNO1Q9NRX1 252 aaKnown RBP11.64□□□□□ -0.55
APTX-220ENST00000476858 RIC8BQ9NVN3 520 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 C5AR2Q9P296 337 aa11.64□□□□□ -0.55
APTX-220ENST00000476858 COL6A6A6NMZ7 2263 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 WDR91A4D1P6 747 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 RGS16O15492 202 aaPredicted RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 PROM1O43490 865 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 SLC28A2O43868 658 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 ESRRBO95718 433 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 FAM58BPP0C7Q3 252 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 IL10P22301 178 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 CPN2P22792 545 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 JAK1P23458 1154 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 SERPINB1P30740 379 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 TNFRSF17Q02223 184 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 DUSP2Q05923 314 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 ACTN3Q08043 901 aaPredicted RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 IFT88Q13099 833 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 SLC13A2Q13183 592 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 IGFBP7Q16270 282 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 PRSS53Q2L4Q9 553 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 ZNF468Q5VIY5 522 aaPredicted RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 LIPMQ5VYY2 423 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 PLAG1Q6DJT9 500 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 JMJD6Q6NYC1 403 aaPredicted RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 IGFL2Q6UWQ7 119 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 THSD4Q6ZMP0 1018 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 COMMD6Q7Z4G1 85 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 CUZD1Q86UP6 607 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 GPR180Q86V85 440 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 ZCCHC7Q8N3Z6 543 aaKnown RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 C1orf52Q8N6N3 182 aaKnown RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 RDH11Q8TC12 318 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 PTPMT1Q8WUK0 201 aaPredicted RBP11.63□□□□□ -0.55
APTX-220ENST00000476858 REPS1Q96D71 796 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 SERPINI1Q99574 410 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 TUBB1Q9H4B7 451 aa11.63□□□□□ -0.55
APTX-220ENST00000476858 LIN28AQ9H9Z2 209 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms