RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 IRAK4Q9NWZ3 460 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 PCDHGB2Q9Y5G2 931 aa27.3■■□□□ 1.96
VEGFA-211ENST00000476772 RALGAPA1Q6GYQ0 2036 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 A0A1W2PRB8 838 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 C1orf226A1L170 272 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 WASHC1A8K0Z3 465 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 NVLO15381 856 aaKnown RBP27.29■■□□□ 1.96
VEGFA-211ENST00000476772 PDPK1O15530 556 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 CPNE6O95741 557 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 ABCB1P08183 1280 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-211ENST00000476772 HSD17B1P14061 328 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 GSK3BP49841 420 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 LIM2P55344 173 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 EEFSECP57772 596 aaKnown RBP27.29■■□□□ 1.96
VEGFA-211ENST00000476772 D2HGDHQ8N465 521 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 C10orf90Q96M02 699 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 COL25A1Q9BXS0 654 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-211ENST00000476772 PCDHAC1Q9H158 963 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 ALG2Q9H553 416 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 SYNDIG1Q9H7V2 258 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 SLAMF7Q9NQ25 335 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 KCMF1Q9P0J7 381 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 DAPP1Q9UN19 280 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 GPR179Q6PRD1 2367 aa27.29■■□□□ 1.96
VEGFA-211ENST00000476772 PGRMC2O15173 223 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 MED26O95402 600 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 RETP07949 1114 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 GRK6P43250 576 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 DUSP3P51452 185 aaPredicted RBP27.28■■□□□ 1.96
VEGFA-211ENST00000476772 HBA1P69905 142 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 SF3A2Q15428 464 aaKnown RBP27.28■■□□□ 1.96
VEGFA-211ENST00000476772 DBX2Q6ZNG2 339 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 KMT5CQ86Y97 462 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 ASB9Q96DX5 294 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 THUMPD3Q9BV44 507 aaKnown RBP27.28■■□□□ 1.96
VEGFA-211ENST00000476772 ZNF768Q9H5H4 540 aaKnown RBP27.28■■□□□ 1.96
VEGFA-211ENST00000476772 TAS2R7Q9NYW3 318 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 PHF11Q9UIL8 331 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 UTS2RQ9UKP6 389 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 ADAMTS20P59510 1910 aa27.28■■□□□ 1.96
VEGFA-211ENST00000476772 NR2F6P10588 404 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 TNFRSF17Q02223 184 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 TRIM25Q14258 630 aaKnown RBP27.27■■□□□ 1.96
VEGFA-211ENST00000476772 GPR19Q15760 415 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 SPATS1Q496A3 300 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 TCTE1Q5JU00 501 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 IFNEQ86WN2 208 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 NATD1Q8N6N6 113 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 SUMF1Q8NBK3 374 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 GOT1L1Q8NHS2 421 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-211ENST00000476772 SH3GL1Q99961 368 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 SPRTNQ9H040 489 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-211ENST00000476772 ANKHQ9HCJ1 492 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 PCDHGB4Q9UN71 923 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 NUP214P35658 2090 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-211ENST00000476772 SGK494L7N484 410 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 ACOT8O14734 319 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 C1QCP02747 245 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 NELFEP18615 380 aaKnown RBP27.27■■□□□ 1.96
VEGFA-211ENST00000476772 CPN2P22792 545 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 PCBP4P57723 403 aaKnown RBP27.27■■□□□ 1.96
VEGFA-211ENST00000476772 GAB1Q13480 694 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 RIPK1Q13546 671 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 CCNIQ14094 377 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 FLOT2Q14254 428 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 NDUFA9Q16795 377 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 DTWD1Q8N5C7 304 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 OR5T3Q8NGG3 340 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 OR9A4Q8NGU2 314 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 PHF12Q96QT6 1004 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 CSF3RQ99062 836 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 KCTD14Q9BQ13 255 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-211ENST00000476772 PIF1Q9H611 641 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 LYRM4Q9HD34 91 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 CES1P1Q9UKY3 287 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 VPS4AQ9UN37 437 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 USP22Q9UPT9 525 aa27.27■■□□□ 1.96
VEGFA-211ENST00000476772 HYKKA2RU49 373 aa27.26■■□□□ 1.95
VEGFA-211ENST00000476772 TOX3O15405 576 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-211ENST00000476772 ZCCHC18P0CG32 403 aa27.26■■□□□ 1.95
VEGFA-211ENST00000476772 BUD31P41223 144 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-211ENST00000476772 FRKP42685 505 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-211ENST00000476772 INAVAQ3KP66 663 aa27.26■■□□□ 1.95
VEGFA-211ENST00000476772 SLC48A1Q6P1K1 146 aa27.26■■□□□ 1.95
VEGFA-211ENST00000476772 HIPK4Q8NE63 616 aa27.26■■□□□ 1.95
VEGFA-211ENST00000476772 CNDP2Q96KP4 475 aaKnown RBP27.26■■□□□ 1.95
VEGFA-211ENST00000476772 ECSITQ9BQ95 431 aa27.26■■□□□ 1.95
VEGFA-211ENST00000476772 SLC35C2Q9NQQ7 365 aa27.26■■□□□ 1.95
VEGFA-211ENST00000476772 ZNF282Q9UDV7 671 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-211ENST00000476772 TMEM150CB9EJG8 249 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 ATP6V1G2O95670 118 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 ZNF806P0C7X5 589 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 FOLR1P15328 257 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 SLC14A1Q13336 389 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 SHISA5Q8N114 240 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 CLEC4FQ8N1N0 589 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 OR4D9Q8NGE8 314 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 TAS2R9Q9NYW1 312 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 FRYLO94915 3013 aa27.25■■□□□ 1.95
VEGFA-211ENST00000476772 FITM1A5D6W6 292 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms